RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PRAMEF18Q5VWM3 479 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 CNNM4Q6P4Q7 775 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 SLFN12Q8IYM2 578 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 CYP2W1Q8TAV3 490 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 DDX12PQ92771 950 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 DEFB129Q9H1M3 183 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 E9PMD0 336 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 POLR2MP0CAP2 368 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 INPP5BP32019 993 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 SREBF1P36956 1147 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 TRAF1Q13077 416 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 TBX2Q13207 712 aaPredicted RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 NCAPH2Q6IBW4 605 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 FAM160B2Q86V87 743 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 TEPSINQ96N21 525 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 RANBP17Q9H2T7 1088 aaKnown RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 FEM1BQ9UK73 627 aa10.65□□□□□ -0.7
COL6A4P1-201ENST00000446690 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTECB2RU33 542 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 FZD9O00144 591 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 MMP14P50281 582 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 COPB1P53618 953 aaKnown RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 MAP3K10Q02779 954 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 RBL2Q08999 1139 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 TMEM119Q4V9L6 283 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 NBPF12Q5TAG4 269 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 CSGALNACT2Q8N6G5 542 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 CCDC112Q8NEF3 446 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 DHTKD1Q96HY7 919 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 BAG1Q99933 345 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 NT5C3AQ9H0P0 336 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 LIMA1Q9UHB6 759 aaKnown RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 PSME4Q14997 1843 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 AKR1B15C9JRZ8 316 aaPredicted RBP10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 MEIS1O00470 390 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 UBXN1Q04323 297 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 SPAG1Q07617 926 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 RAD51AP2Q09MP3 1159 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 Q4G0T1 1027 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 CEP135Q66GS9 1140 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 ANKRD40Q6AI12 368 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 UNC13DQ70J99 1090 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 TC2NQ8N9U0 490 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 ETNPPLQ8TBG4 499 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 P2RX5Q93086 422 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 PRIMPOLQ96LW4 560 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 LRRC27Q9C0I9 530 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 FZD1Q9UP38 647 aa10.64□□□□□ -0.71
COL6A4P1-201ENST00000446690 BICDL2A1A5D9 508 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 MSH4O15457 936 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 MED24O75448 989 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 PTGER2P43116 358 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 TTI2Q6NXR4 508 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 MOXD1Q6UVY6 613 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 SLC30A10Q6XR72 485 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 ARHGAP27Q6ZUM4 889 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 KIAA0895Q8NCT3 520 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 LENG9Q96B70 501 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 MBOAT7Q96N66 472 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 TANGO6Q9C0B7 1094 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 TMX1Q9H3N1 280 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZHX3Q9H4I2 956 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 KDM3AQ9Y4C1 1321 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 KIF13BQ9NQT8 1826 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 NPHP3-ACAD11A0A0J9YXS1 232 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 PVALEFA0A1B0GWK0 134 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 KRT18P05783 430 aaKnown RBP10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 PLA2G4BP0C869 781 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 CCNE1P24864 410 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 LRRC41Q15345 812 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 CATSPER3Q86XQ3 398 aa10.63□□□□□ -0.71
COL6A4P1-201ENST00000446690 PPP1R13BQ96KQ4 1090 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms