RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 EFCAB13Q8IY85 973 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GJD3Q8N144 294 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ZNF619Q8N2I2 560 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 LRRC71Q8N4P6 559 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 DCLK2Q8N568 766 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NBPF15Q8N660 670 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SPERTQ8NA61 448 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 USP38Q8NB14 1042 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ZNF540Q8NDQ6 660 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ANKRD20A12PQ8NF67 263 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TOR1AIP2Q8NFQ8 470 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SLC30A5Q8TAD4 765 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GOLGA5Q8TBA6 731 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ADAMTS18Q8TE60 1221 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NSUN6Q8TEA1 469 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 UTP15Q8TED0 518 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 KCTD13Q8WZ19 329 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GMCL1Q96IK5 515 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ZNF845Q96IR2 970 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 C1orf74Q96LT6 269 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CCDC138Q96M89 665 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 C16orf45Q96MC5 204 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NT5C1BQ96P26 610 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CRBNQ96SW2 442 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SETDB2Q96T68 719 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 EYA3Q99504 573 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 BARD1Q99728 777 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CRB3Q9BUF7 120 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 MENTQ9BUN1 341 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TMEM121BQ9BXQ6 578 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CFHR5Q9BXR6 569 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CAPS2Q9BXY5 557 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 EDEM3Q9BZQ6 932 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NACA2Q9H009 215 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 C2orf40Q9H1Z8 148 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 MRPL46Q9H2W6 279 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 FAM204AQ9H8W3 233 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 EHMT1Q9H9B1 1298 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CYP4F12Q9HCS2 524 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ST7Q9NRC1 585 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 KBTBD4Q9NVX7 518 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IL1RAPL1Q9NZN1 696 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SUCLA2Q9P2R7 463 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ORC3Q9UBD5 711 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 MOSPD1Q9UJG1 213 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CHIC2Q9UKJ5 165 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CARD8Q9Y2G2 431 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GPR52Q9Y2T5 361 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 MAP4K5Q9Y4K4 846 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ZFP37Q9Y6Q3 630 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GAKO14976 1311 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 BRD4O60885 1362 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 ARPC4-TTLL3A0A0A6YYG9 625 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 A0A0G2JPF8 293 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 C17orf113A0A1B0GUU1 675 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 DDX11L8A8MPP1 907 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 HNRNPCL3B7ZW38 293 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SGK1O00141 431 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 GABRDO14764 452 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 PSMA7O14818 248 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 PLD2O14939 933 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 STX6O43752 255 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 CEP104O60308 925 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 NMT2O60551 498 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SOAT2O75908 522 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 MICAL2O94851 1124 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 FGFR1OPO95684 399 aaKnown RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 HSPA4LO95757 839 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 TBC1D8O95759 1140 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 IL33O95760 270 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SLC4A1P02730 911 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SLC3A2P08195 630 aaKnown RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 HNRNPCL4P0DMR1 293 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 GZMAP12544 262 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SCG2P13521 617 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 PLCG2P16885 1265 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 ALOX12P18054 663 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 LAG3P18627 525 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 GNAT2P19087 354 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 HLA-DPA1P20036 260 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 PRKAR1BP31321 381 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 CSTF2P33240 577 aaKnown RBP eCLIP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 MCM5P33992 734 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 NF2P35240 595 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 EIF4A3P38919 411 aaKnown RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 GRIK1P39086 918 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 ECE1P42892 770 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 RECQLP46063 649 aaPredicted RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 SULT1E1P49888 294 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 ETV1P50549 477 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 ALDH3A2P51648 485 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 CLCN2P51788 898 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 KIF11P52732 1056 aa3.1□□□□□ -1.91
UBBP3-201ENST00000445497 RRP1P56182 461 aaKnown RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 EIF6P56537 245 aaKnown RBP3.1□□□□□ -1.91
UBBP3-201ENST00000445497 RWDD2BP57060 319 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms