RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 VCPP55072 806 aaKnown RBP10.8□□□□□ -0.68
LINC00642-203ENST00000444942 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
LINC00642-203ENST00000444942 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 IQCA1Q86XH1 822 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 GMCL1P1Q8NEA9 526 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 SNX21Q969T3 373 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 SCLYQ96I15 445 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 UBAC1Q9BSL1 405 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 SUGCTQ9HAC7 445 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
LINC00642-203ENST00000444942 TNKSO95271 1327 aa10.8□□□□□ -0.68
LINC00642-203ENST00000444942 TANC1Q9C0D5 1861 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
LINC00642-203ENST00000444942 AVPR2P30518 371 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 SLC16A2P36021 539 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 TTBK2Q6IQ55 1244 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 RCSD1Q6JBY9 416 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 NCOA7Q8NI08 942 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 RMDN1Q96DB5 314 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 ZSCAN10Q96SZ4 725 aaPredicted RBP10.79□□□□□ -0.68
LINC00642-203ENST00000444942 POP1Q99575 1024 aaKnown RBP10.79□□□□□ -0.68
LINC00642-203ENST00000444942 SLF1Q9BQI6 1058 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 TCP11L1Q9NUJ3 509 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 FAM184BQ9ULE4 1060 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 PPP1R9AQ9ULJ8 1098 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
LINC00642-203ENST00000444942 IFIT3O14879 490 aaKnown RBP10.78□□□□□ -0.68
LINC00642-203ENST00000444942 C6orf222P0C671 652 aaPredicted RBP10.78□□□□□ -0.68
LINC00642-203ENST00000444942 GOLGA8HP0CJ92 632 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 FCER1AP12319 257 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 ACTN1P12814 892 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 NUBP1P53384 320 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 COL9A3Q14050 684 aaPredicted RBP10.78□□□□□ -0.68
LINC00642-203ENST00000444942 TMEM132BQ14DG7 1078 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 NECTIN1Q15223 517 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 RABEP1Q15276 862 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 ENAHQ8N8S7 591 aaPredicted RBP10.78□□□□□ -0.68
LINC00642-203ENST00000444942 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 LRRC2Q9BYS8 371 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 CPVLQ9H3G5 476 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 FEM1BQ9UK73 627 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 CNPY2Q9Y2B0 182 aa10.78□□□□□ -0.68
LINC00642-203ENST00000444942 DIS3Q9Y2L1 958 aaKnown RBP10.78□□□□□ -0.68
LINC00642-203ENST00000444942 LCHNA4D1U4 455 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 VWA5AO00534 786 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 STAT2P52630 851 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 IFIT1BQ5T764 474 aaKnown RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 PRPF38AQ8NAV1 312 aaKnown RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 PNMA1Q8ND90 353 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 TTC14Q96N46 770 aa10.77□□□□□ -0.68
LINC00642-203ENST00000444942 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 SLKQ9H2G2 1235 aaPredicted RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 RAVER2Q9HCJ3 691 aaKnown RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 GPHNQ9NQX3 736 aaPredicted RBP10.77□□□□□ -0.68
LINC00642-203ENST00000444942 ATG2AQ2TAZ0 1938 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ERICH2A1L162 156 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ZBED4O75132 1171 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 PGK2P07205 417 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 PDHBP11177 359 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 NOVP48745 357 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 GJA9P57773 515 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ANTXR2P58335 489 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ERVK-21P61565 698 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ZXDAP98168 799 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 WTAPQ15007 396 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 SMAD2Q15796 467 aaKnown RBP10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ST3GAL2Q16842 350 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 ADCK5Q3MIX3 580 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 GNASQ5JWF2 1037 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 DGKHQ86XP1 1220 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
LINC00642-203ENST00000444942 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 CHURC1Q8WUH1 139 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 DCAF4Q8WV16 495 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
LINC00642-203ENST00000444942 GMCL1Q96IK5 515 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 KIF2CQ99661 725 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 TRPV6Q9H1D0 765 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 SPC25Q9HBM1 224 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 HOMER2Q9NSB8 354 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 MYO7AQ13402 2215 aa10.77□□□□□ -0.69
LINC00642-203ENST00000444942 GPR179Q6PRD1 2367 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms