RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PLA2G4BP0C869 781 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 TFAMQ00059 246 aaKnown RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 PIK3R2O00459 728 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 PPP6R2O75170 966 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 SLC8A3P57103 927 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 GNPTABQ3T906 1256 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 VSIG1Q86XK7 387 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 TMEM47Q9BQJ4 181 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 BHMT2Q9H2M3 363 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 SMYD2Q9NRG4 433 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 C1orf112Q9NSG2 853 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 AFF2P51816 1311 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 PAK2Q13177 524 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 FAM49AQ9H0Q0 323 aaPredicted RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 SSH2Q76I76 1423 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 WDR91A4D1P6 747 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 M0QZ92 97 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 CAPN9O14815 690 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 CDO1Q16878 200 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 FAM186BQ8IYM0 893 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 SLFN12Q8IYM2 578 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 FOXP1Q9H334 677 aaPredicted RBP8.75□□□□□ -1.01
RIF1-205ENST00000444746 EPB41L5Q9HCM4 733 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 ZNF148Q9UQR1 794 aa8.75□□□□□ -1.01
RIF1-205ENST00000444746 LACTBP83111 547 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 DMP1Q13316 513 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 TSTA3Q13630 321 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 CLUL1Q15846 466 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 SYCP2LQ5T4T6 812 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 LMBRD2Q68DH5 695 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 SMC1BQ8NDV3 1235 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 TDRD7Q8NHU6 1098 aaKnown RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 SREK1Q8WXA9 508 aaKnown RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ODF2LQ9ULJ1 636 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 PACSIN2Q9UNF0 486 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 H7C0C1 242 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 TXNDC9O14530 226 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 TEX33O43247 280 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 TNNC2P02585 160 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ATP5OP48047 213 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 LIG3P49916 1009 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 PEX3P56589 373 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 NXNQ6DKJ4 435 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 THNSL1Q8IYQ7 743 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 KIAA1524Q8TCG1 905 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 DPF2Q92785 391 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ZKSCAN8Q15776 578 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 HP1BP3Q5SSJ5 553 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 RILPQ96NA2 401 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ZWILCHQ9H900 591 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 NHEJ1Q9H9Q4 299 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 COL4A3BPQ9Y5P4 624 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 TDP2O95551 362 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ETF1P62495 437 aaKnown RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 SPDYE2Q495Y8 402 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ZNF658Q5TYW1 1059 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 CYP4F22Q6NT55 531 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 DYDC2Q96IM9 177 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 RCOR1Q9UKL0 485 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 SPATA31A3Q5VYP0 1347 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ECE2O60344 883 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 H2AFZP0C0S5 128 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 PPP1R2P41236 205 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 H2AFVQ71UI9 128 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 ZBTB8OSQ8IWT0 167 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 METTL14Q9HCE5 456 aaKnown RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 GPR108Q9NPR9 543 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 TAL1P17542 331 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 SESN3P58005 492 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 PPP2R5BQ15173 497 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 DENND2CQ68D51 928 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 CABS1Q96KC9 395 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
RIF1-205ENST00000444746 BAIAP2L1Q9UHR4 511 aa8.74□□□□□ -1.01
RIF1-205ENST00000444746 PRPF3O43395 683 aaKnown RBP8.73□□□□□ -1.01
RIF1-205ENST00000444746 INPP5BP32019 993 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 PLTPP55058 493 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 ENAHQ8N8S7 591 aaPredicted RBP8.73□□□□□ -1.01
RIF1-205ENST00000444746 NLRP4Q96MN2 994 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 KLRK1P26718 216 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 RBM6P78332 1123 aaKnown RBP8.73□□□□□ -1.01
RIF1-205ENST00000444746 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 NOP9Q86U38 636 aaKnown RBP8.73□□□□□ -1.01
RIF1-205ENST00000444746 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 CCT6BQ92526 530 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 CEP95Q96GE4 821 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 PCDHA6Q9UN73 950 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
RIF1-205ENST00000444746 AFG3L2Q9Y4W6 797 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 PCDHA8Q9Y5H6 950 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
RIF1-205ENST00000444746 POTECB2RU33 542 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms