RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 LY6KQ17RY6 165 aa25.16■■□□□ 1.62
TRAF4-205ENST00000444415 CXCL17Q6UXB2 119 aa25.16■■□□□ 1.62
TRAF4-205ENST00000444415 AP5M1Q9H0R1 490 aa25.16■■□□□ 1.62
TRAF4-205ENST00000444415 NCOA5Q9HCD5 579 aaKnown RBP25.16■■□□□ 1.62
TRAF4-205ENST00000444415 GRIN2DO15399 1336 aa25.16■■□□□ 1.62
TRAF4-205ENST00000444415 ANAPC15P60006 121 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 TLE2Q04725 743 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 TTLL4Q14679 1199 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 PKN1Q16512 942 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 OR6J1Q8NGC5 347 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 PDLIM7Q9NR12 457 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 ELP1O95163 1332 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 NKRFO15226 690 aaKnown RBP eCLIP25.15■■□□□ 1.622e-7■■□□□ 11.4
TRAF4-205ENST00000444415 PPFIA3O75145 1194 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 CDK7P50613 346 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 CCT2P78371 535 aaKnown RBP25.15■■□□□ 1.62
TRAF4-205ENST00000444415 ARHGAP1Q07960 439 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 SH3RF1Q7Z6J0 888 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 GLT1D1Q96MS3 346 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 GDF15Q99988 308 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 PSTPIP2Q9H939 334 aa25.15■■□□□ 1.62
TRAF4-205ENST00000444415 DDX41Q9UJV9 622 aaKnown RBP25.15■■□□□ 1.62
TRAF4-205ENST00000444415 PHKBQ93100 1093 aa25.14■■□□□ 1.61
TRAF4-205ENST00000444415 PDRG1Q9NUG6 133 aa25.14■■□□□ 1.61
TRAF4-205ENST00000444415 BARHL2Q9NY43 387 aa25.14■■□□□ 1.61
TRAF4-205ENST00000444415 RBM27Q9P2N5 1060 aaKnown RBP25.14■■□□□ 1.61
TRAF4-205ENST00000444415 A6NJR5 290 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 ADAMTS3O15072 1205 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 SEMA3FQ13275 785 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 PFKFB3Q16875 520 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-205ENST00000444415 ANKRD33Q7Z3H0 272 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 SLC43A3Q8NBI5 491 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 SMARCC2Q8TAQ2 1214 aa25.13■■□□□ 1.61
TRAF4-205ENST00000444415 CCDC196A0A1B0GTZ2 297 aa25.12■■□□□ 1.61
TRAF4-205ENST00000444415 TRIM43BA6NCK2 446 aa25.12■■□□□ 1.61
TRAF4-205ENST00000444415 CCND2P30279 289 aa25.12■■□□□ 1.61
TRAF4-205ENST00000444415 MAGEA10P43363 369 aaPredicted RBP25.12■■□□□ 1.61
TRAF4-205ENST00000444415 PURAQ00577 322 aaKnown RBP25.12■■□□□ 1.61
TRAF4-205ENST00000444415 SP2Q02086 613 aa25.12■■□□□ 1.61
TRAF4-205ENST00000444415 TRIM43Q96BQ3 446 aaPredicted RBP25.12■■□□□ 1.61
TRAF4-205ENST00000444415 PQBP1O60828 265 aaKnown RBP25.11■■□□□ 1.61
TRAF4-205ENST00000444415 IFNAR1P17181 557 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 ITGB8P26012 769 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 NAPAP54920 295 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 PSMC6P62333 389 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 FAAP100Q0VG06 881 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 PPP1R18Q6NYC8 613 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 ZNF274Q96GC6 653 aaPredicted RBP25.11■■□□□ 1.61
TRAF4-205ENST00000444415 INPP4AQ96PE3 977 aaPredicted RBP25.11■■□□□ 1.61
TRAF4-205ENST00000444415 BCAS3Q9H6U6 928 aa25.11■■□□□ 1.61
TRAF4-205ENST00000444415 A0A0U1RQG5 324 aaPredicted RBP25.1■■□□□ 1.61
TRAF4-205ENST00000444415 ARVCFO00192 962 aa25.1■■□□□ 1.61
TRAF4-205ENST00000444415 PRPF3O43395 683 aaKnown RBP25.1■■□□□ 1.61
TRAF4-205ENST00000444415 CUL5Q93034 780 aa25.1■■□□□ 1.61
TRAF4-205ENST00000444415 ALDH8A1Q9H2A2 487 aaPredicted RBP25.1■■□□□ 1.61
TRAF4-205ENST00000444415 RIC8AQ9NPQ8 531 aa25.1■■□□□ 1.61
TRAF4-205ENST00000444415 MRVI1Q9Y6F6 885 aa25.1■■□□□ 1.61
TRAF4-205ENST00000444415 hCG_1984214I3L0E3 225 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 GH1P01241 217 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 SCG2P13521 617 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 CLK2P49760 499 aaKnown RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 CPT1AP50416 773 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 HABP4Q5JVS0 413 aaKnown RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 PCNX4Q63HM2 1172 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 ZNF713Q8N859 430 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 AFG1LQ8WV93 481 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 EMID1Q96A84 441 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 TOX2Q96NM4 488 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 MMP3P08254 477 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 UBA1P22314 1058 aaKnown RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 FAM126BQ8IXS8 530 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 RNF26Q9BY78 433 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-205ENST00000444415 RTEL1Q9NZ71 1219 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 TPCN1Q9ULQ1 816 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 PCDHA6Q9UN73 950 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 PCDHA8Q9Y5H6 950 aa25.09■■□□□ 1.61
TRAF4-205ENST00000444415 CABYRO75952 493 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 CLTBP09497 229 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 ICAM3P32942 547 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 AK2P54819 239 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 MDM2Q00987 491 aaPredicted RBP25.08■■□□□ 1.6
TRAF4-205ENST00000444415 STK3Q13188 491 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 ITGA7Q13683 1181 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 PPP1R13LQ8WUF5 828 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 PGBD1Q96JS3 809 aa25.08■■□□□ 1.6
TRAF4-205ENST00000444415 PRDM5Q9NQX1 630 aaPredicted RBP25.08■■□□□ 1.6
TRAF4-205ENST00000444415 SMCO2A6NFE2 343 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 ZEB2O60315 1214 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 CD4P01730 458 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 MYL3P08590 195 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 SCRN1Q12765 414 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 MYSM1Q5VVJ2 828 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 VTI1AQ96AJ9 217 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 SLC26A6Q9BXS9 759 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 POLR3EQ9NVU0 708 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 TMEM260Q9NX78 707 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 TBX21Q9UL17 535 aa25.07■■□□□ 1.6
TRAF4-205ENST00000444415 SORBS3O60504 671 aa25.06■■□□□ 1.6
TRAF4-205ENST00000444415 ADCY7P51828 1080 aa25.06■■□□□ 1.6
TRAF4-205ENST00000444415 TELO2Q9Y4R8 837 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms