RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 KIAA0754O94854 1291 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 INPP5BP32019 993 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 KDM7AQ6ZMT4 941 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 CD302Q8IX05 232 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 TSEN2Q8NCE0 465 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 C1orf131Q8NDD1 294 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 BAP1Q92560 729 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 LARP4BQ92615 738 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 CEP72Q9P209 647 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 PRDX5P30044 214 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 SIK1P57059 783 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ASTE1Q2TB18 679 aaPredicted RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 KLHDC7AQ5VTJ3 777 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 EEF2KMTQ96G04 330 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ZIM3Q96PE6 472 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 TLR10Q9BXR5 811 aa17.07■□□□□ 0.32
AP1S3-206ENST00000443700 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
AP1S3-206ENST00000443700 ESYT2A0FGR8 921 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
AP1S3-206ENST00000443700 NDUFAB1O14561 156 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 EPHB6O15197 1021 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 RGL2O15211 777 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 SERPING1P05155 500 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 TECP42680 631 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
AP1S3-206ENST00000443700 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
AP1S3-206ENST00000443700 MMTAG2Q9BU76 263 aaKnown RBP17.06■□□□□ 0.32
AP1S3-206ENST00000443700 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
AP1S3-206ENST00000443700 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 NAP1L1P55209 391 aaKnown RBP17.05■□□□□ 0.32
AP1S3-206ENST00000443700 TNNC1P63316 161 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 GSTO1P78417 241 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 GRB10Q13322 594 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 SEPT2Q15019 361 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 SLC35G1Q2M3R5 365 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 EMC10Q5UCC4 262 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
AP1S3-206ENST00000443700 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 CES2O00748 559 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 NCK2O43639 380 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 HEXIM1O94992 359 aaKnown RBP17.05■□□□□ 0.32
AP1S3-206ENST00000443700 CXCR5P32302 372 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 LIG3P49916 1009 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 RASSF7Q02833 373 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 SFMBT2Q5VUG0 894 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
AP1S3-206ENST00000443700 EIF1ADQ8N9N8 165 aaKnown RBP17.05■□□□□ 0.32
AP1S3-206ENST00000443700 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
AP1S3-206ENST00000443700 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 MYMKA6NI61 221 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 HMGB1P1B2RPK0 211 aaPredicted RBP17.04■□□□□ 0.32
AP1S3-206ENST00000443700 BAG3O95817 575 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 SLC1A4P43007 532 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 GFPT1Q06210 699 aaPredicted RBP17.04■□□□□ 0.32
AP1S3-206ENST00000443700 CALCRLQ16602 461 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 SKIDA1Q1XH10 827 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 SWT1Q5T5J6 900 aaKnown RBP17.04■□□□□ 0.32
AP1S3-206ENST00000443700 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 TBCKQ8TEA7 893 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 RAD54LQ92698 747 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
AP1S3-206ENST00000443700 PSMB7Q99436 277 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
AP1S3-206ENST00000443700 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
AP1S3-206ENST00000443700 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 USP17L3A6NCW0 530 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 USP17L4A6NCW7 530 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-206ENST00000443700 GNA14O95837 355 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 PDCLQ13371 301 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 ITPK1Q13572 414 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 NAB2Q15742 525 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 SLC10A5Q5PT55 438 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-206ENST00000443700 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 USP17L1Q7RTZ2 530 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 CNPY4Q8N129 248 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms