RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 SLIT2O94813 1529 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 NR2F2P24468 414 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 CCNE1P24864 410 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 XKR9Q5GH70 373 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 MICALL2Q8IY33 904 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 PROM2Q8N271 834 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 ACRBPQ8NEB7 543 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 TBC1D5Q92609 795 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 TEKT3Q9BXF9 490 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 SERPINA10Q9UK55 444 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 GINS2Q9Y248 185 aa11.73□□□□□ -0.53
CALD1-210ENST00000443197 CALUO43852 315 aaPredicted RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 IGSF3O75054 1194 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 MAGEA1P43355 309 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 DHTKD1Q96HY7 919 aaPredicted RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 TCHHQ07283 1943 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 STX10O60499 249 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 PHACTR2O75167 634 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 PRPF6O94906 941 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 POLR2FP61218 127 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 NCAPG2Q86XI2 1143 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 DCPSQ96C86 337 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 ABCC6O95255 1503 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 SHMT1P34896 483 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 EMILIN3Q9NT22 766 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
CALD1-210ENST00000443197 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
CALD1-210ENST00000443197 WNT7AO00755 349 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 RGL2O15211 777 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
CALD1-210ENST00000443197 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
CALD1-210ENST00000443197 SHROOM1Q2M3G4 852 aaPredicted RBP11.71□□□□□ -0.53
CALD1-210ENST00000443197 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 PRR12Q9ULL5 1215 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 COL4A3BPQ9Y5P4 624 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 SLC37A4O43826 429 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 DPYDQ12882 1025 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 STK4Q13043 487 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 SLC30A10Q6XR72 485 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 PLEKHA4Q9H4M7 779 aa11.71□□□□□ -0.53
CALD1-210ENST00000443197 EPN1Q9Y6I3 576 aaPredicted RBP11.71□□□□□ -0.53
CALD1-210ENST00000443197 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
CALD1-210ENST00000443197 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 SMTNP53814 917 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 KLHL30Q0D2K2 578 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 RGS22Q8NE09 1264 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 CCDC127Q96BQ5 260 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 TRIM9Q9C026 710 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.54
CALD1-210ENST00000443197 MAGEF1Q9HAY2 307 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 NYAP2Q9P242 653 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 ABCB11O95342 1321 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 K7ENM7 598 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 ENC1O14682 589 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.54
CALD1-210ENST00000443197 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.544e-6■■□□□ 14.4
CALD1-210ENST00000443197 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 DACT2Q5SW24 774 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 RBM43Q6ZSC3 357 aaKnown RBP11.71□□□□□ -0.54
CALD1-210ENST00000443197 ERO1AQ96HE7 468 aa11.71□□□□□ -0.54
CALD1-210ENST00000443197 A0A087X0B3 334 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
CALD1-210ENST00000443197 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
CALD1-210ENST00000443197 ERICH4A6NGS2 130 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 ENTPD3O75355 529 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 EEF1GP26641 437 aaKnown RBP11.7□□□□□ -0.54
CALD1-210ENST00000443197 CXCL9Q07325 125 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 BIRC3Q13489 604 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 MTF1Q14872 753 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 GOLGA1Q92805 767 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 NAPGQ99747 312 aaPredicted RBP11.7□□□□□ -0.54
CALD1-210ENST00000443197 PCIF1Q9H4Z3 704 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms