RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZNF652Q9Y2D9 606 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 A0A1W2PQJ5 194 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 LRRC53A6NM62 1247 aa22.42■■□□□ 1.18
SHOX2-203ENST00000441443 ARL6IP4Q66PJ3 421 aaKnown RBP22.42■■□□□ 1.18
SHOX2-203ENST00000441443 ATP2C2O75185 946 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 CCDC121Q6ZUS5 278 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 RPAINQ86UA6 219 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 OR2W6PQ8NHA6 318 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 PACSIN2Q9UNF0 486 aaPredicted RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 SLC1A4P43007 532 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 GLE1Q53GS7 698 aaKnown RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 CDCA7Q9BWT1 371 aaPredicted RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 SRP68Q9UHB9 627 aaKnown RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 FTCDO95954 541 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 C6orf89Q6UWU4 347 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 IQCA1Q86XH1 822 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 CELF1Q92879 486 aaKnown RBP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 GPKOWQ92917 476 aaPredicted RBP eCLIP22.41■■□□□ 1.18
SHOX2-203ENST00000441443 KBTBD4Q9NVX7 518 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
SHOX2-203ENST00000441443 EVX2Q03828 476 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 FIGNQ5HY92 759 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 SCLT1Q96NL6 688 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.4■■□□□ 1.18
SHOX2-203ENST00000441443 C21orf2O43822 256 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 KLRK1P26718 216 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 NOX5Q96PH1 765 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 ROBO1Q9Y6N7 1651 aa22.4■■□□□ 1.18
SHOX2-203ENST00000441443 GOLGA6L7A0A1B0GV03 622 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 DNM1LO00429 736 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 QPCTQ16769 361 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 FAM114A1Q8IWE2 563 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 ZSCAN29Q8IWY8 852 aaPredicted RBP22.39■■□□□ 1.18
SHOX2-203ENST00000441443 HAUS2Q9NVX0 235 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.18
SHOX2-203ENST00000441443 BICDL2A1A5D9 508 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 TMOD1P28289 359 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 HNRNPH3P31942 346 aaKnown RBP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 ASIC1P78348 528 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 E2F5Q15329 346 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 NGLY1Q96IV0 654 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 OSBPL7Q9BZF2 842 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 DDX20Q9UHI6 824 aaKnown RBP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 COL14A1Q05707 1796 aaKnown RBP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 MYH14Q7Z406 1995 aaKnown RBP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 HMGB1P1B2RPK0 211 aaPredicted RBP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 EMC10Q5UCC4 262 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 CYB5D1Q6P9G0 228 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 CD302Q8IX05 232 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 KLHL7Q8IXQ5 586 aa22.39■■□□□ 1.17
SHOX2-203ENST00000441443 BCCIPQ9P287 314 aaKnown RBP eCLIP22.39■■□□□ 1.17
SHOX2-203ENST00000441443 MAGEB6P1A0A0J9YX57 407 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 CLGNO14967 610 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 HLTFQ14527 1009 aaKnown RBP eCLIP22.38■■□□□ 1.17
SHOX2-203ENST00000441443 FAM228AQ86W67 206 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 PROCA1Q8NCQ7 364 aaPredicted RBP22.38■■□□□ 1.17
SHOX2-203ENST00000441443 VEZTQ9HBM0 779 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 SIK3Q9Y2K2 1263 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 SNCBQ16143 134 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 TDRD12Q587J7 1177 aaKnown RBP22.38■■□□□ 1.17
SHOX2-203ENST00000441443 PARP9Q8IXQ6 854 aa22.38■■□□□ 1.17
SHOX2-203ENST00000441443 PALMO75781 387 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 LCA5LO95447 670 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 TBC1D9BQ66K14 1250 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 BLIDQ8IZY5 108 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 FUKQ8N0W3 1084 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 MIEF2Q96C03 454 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 NDST4Q9H3R1 872 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 GOLGA6L10A6NI86 522 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 PLCG1P19174 1290 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 VWA3BQ502W6 1294 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 CAVIN4Q5BKX8 364 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 FAM47AQ5JRC9 791 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 MREGQ8N565 214 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 CCDC155Q8N6L0 562 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 SLC39A2Q9NP94 309 aa22.37■■□□□ 1.17
SHOX2-203ENST00000441443 FRMD3A2A2Y4 597 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 RAD51CO43502 376 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 CALM1P0DP23 149 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 CALM2P0DP24 149 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 CALM3P0DP25 149 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 PFKFB3Q16875 520 aaPredicted RBP22.36■■□□□ 1.17
SHOX2-203ENST00000441443 WLSQ5T9L3 541 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 SEMA6BQ9H3T3 888 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 TMBIM4Q9HC24 238 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 GMNCA6NCL1 334 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 KIRREL3Q8IZU9 778 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 TRIM9Q9C026 710 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 OPLAHO14841 1288 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 INF2Q27J81 1249 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 PPP4R3AQ6IN85 833 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
SHOX2-203ENST00000441443 EHHADHQ08426 723 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 NLRC4Q9NPP4 1024 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 ANAPC4Q9UJX5 808 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms