RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 CHST3Q7LGC8 479 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 TAAR1Q96RJ0 339 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 TGS1Q96RS0 853 aaKnown RBP24.17■■□□□ 1.46
TRIM39-210ENST00000440271 GTF2IRD1Q9UHL9 959 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 FAM86C2PA6NEL3 165 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 GOLGA8HP0CJ92 632 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 C7orf31Q8N865 590 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 NSUN6Q8TEA1 469 aaKnown RBP24.16■■□□□ 1.46
TRIM39-210ENST00000440271 FAM227BQ96M60 508 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 MAF1Q9H063 256 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 CPVLQ9H3G5 476 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 HDAC6Q9UBN7 1215 aa24.16■■□□□ 1.46
TRIM39-210ENST00000440271 COL4A4P53420 1690 aaPredicted RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 BRWD1Q9NSI6 2320 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 LINC01553A4QN01 128 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 HSPD1P10809 573 aaKnown RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 HAND2P61296 217 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 DGKDQ16760 1214 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 MCMDC2Q4G0Z9 681 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 GPATCH4Q5T3I0 446 aaKnown RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 MFSD6Q6ZSS7 791 aa24.15■■□□□ 1.46
TRIM39-210ENST00000440271 SYTL5Q8TDW5 730 aaPredicted RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 UBE2ZQ9H832 354 aaPredicted RBP24.15■■□□□ 1.46
TRIM39-210ENST00000440271 EFCAB14O75071 495 aa24.14■■□□□ 1.45
TRIM39-210ENST00000440271 IKBKEQ14164 716 aa24.14■■□□□ 1.45
TRIM39-210ENST00000440271 STXBP2Q15833 593 aa24.14■■□□□ 1.45
TRIM39-210ENST00000440271 IWS1Q96ST2 819 aa24.14■■□□□ 1.45
TRIM39-210ENST00000440271 COL20A1Q9P218 1284 aa24.14■■□□□ 1.45
TRIM39-210ENST00000440271 DDX41Q9UJV9 622 aaKnown RBP24.14■■□□□ 1.45
TRIM39-210ENST00000440271 A0A0D9SFI3 127 aa24.13■■□□□ 1.45
TRIM39-210ENST00000440271 PSEN2P49810 448 aa24.13■■□□□ 1.45
TRIM39-210ENST00000440271 PTK7Q13308 1070 aa24.13■■□□□ 1.45
TRIM39-210ENST00000440271 RMDN3Q96TC7 470 aa24.13■■□□□ 1.45
TRIM39-210ENST00000440271 ALG1Q9BT22 464 aa24.13■■□□□ 1.45
TRIM39-210ENST00000440271 ABCB11O95342 1321 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 ZMYM6O95789 1325 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 RBAK-RBAKDNI3L0D1 243 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 PCP11498 1178 aaKnown RBP24.12■■□□□ 1.45
TRIM39-210ENST00000440271 CDC37Q16543 378 aaPredicted RBP24.12■■□□□ 1.45
TRIM39-210ENST00000440271 TRIM71Q2Q1W2 868 aaKnown RBP24.12■■□□□ 1.45
TRIM39-210ENST00000440271 LEXMQ3ZCV2 418 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 FAM117BQ6P1L5 589 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 TRAF7Q6Q0C0 670 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 CRBNQ96SW2 442 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 ZKSCAN3Q9BRR0 538 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 KATNAL1Q9BW62 490 aa24.12■■□□□ 1.45
TRIM39-210ENST00000440271 MFSD10Q14728 455 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 ZNF618Q5T7W0 954 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 ZNF589Q86UQ0 364 aaPredicted RBP24.11■■□□□ 1.45
TRIM39-210ENST00000440271 DGKHQ86XP1 1220 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 MCF2L2Q86YR7 1114 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 TBC1D10CQ8IV04 446 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 FAM178BQ8IXR5 827 aa24.11■■□□□ 1.45
TRIM39-210ENST00000440271 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.11■■□□□ 1.45
TRIM39-210ENST00000440271 EMID1Q96A84 441 aaPredicted RBP24.11■■□□□ 1.45
TRIM39-210ENST00000440271 HAS3O00219 553 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 KCNA5P22460 613 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 LAMC2Q13753 1193 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 MBTPS1Q14703 1052 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 KIAA0753Q2KHM9 967 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 ANKRD45Q5TZF3 282 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 ARHGEF16Q5VV41 709 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 ADGRF4Q8IZF3 695 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 GJD3Q8N144 294 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 ESR2Q92731 530 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 WNT8BQ93098 351 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 ZBTB47Q9UFB7 747 aaPredicted RBP24.1■■□□□ 1.45
TRIM39-210ENST00000440271 INSL6Q9Y581 213 aa24.1■■□□□ 1.45
TRIM39-210ENST00000440271 LGR5O75473 907 aa24.09■■□□□ 1.45
TRIM39-210ENST00000440271 EIF3JO75822 258 aaKnown RBP24.09■■□□□ 1.45
TRIM39-210ENST00000440271 F2P00734 622 aa24.09■■□□□ 1.45
TRIM39-210ENST00000440271 ZNF200P98182 395 aaPredicted RBP24.09■■□□□ 1.45
TRIM39-210ENST00000440271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRIM39-210ENST00000440271 PPTC7Q8NI37 304 aa24.09■■□□□ 1.45
TRIM39-210ENST00000440271 C17orf80Q9BSJ5 609 aa24.09■■□□□ 1.45
TRIM39-210ENST00000440271 RNF41Q9H4P4 317 aaPredicted RBP24.09■■□□□ 1.45
TRIM39-210ENST00000440271 ZNF286BP0CG31 522 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 EIF2AK2P19525 551 aaKnown RBP24.08■■□□□ 1.45
TRIM39-210ENST00000440271 PDE1AP54750 535 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 NMIQ13287 307 aaPredicted RBP24.08■■□□□ 1.45
TRIM39-210ENST00000440271 TICAM2Q86XR7 235 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 DHX37Q8IY37 1157 aaKnown RBP24.08■■□□□ 1.45
TRIM39-210ENST00000440271 PNMA1Q8ND90 353 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 FBXO22Q8NEZ5 403 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 MRPL11Q9Y3B7 192 aaKnown RBP24.08■■□□□ 1.45
TRIM39-210ENST00000440271 MRVI1Q9Y6F6 885 aa24.08■■□□□ 1.45
TRIM39-210ENST00000440271 NR3C2P08235 984 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 IL9P15248 144 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 HIC1Q14526 733 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 QRICH1Q2TAL8 776 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 NEDD4P46934 1319 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 CCDC171Q6TFL3 1326 aa24.07■■□□□ 1.44
TRIM39-210ENST00000440271 KIAA1217Q5T5P2 1943 aa24.06■■□□□ 1.44
TRIM39-210ENST00000440271 PRR33A8MZF0 331 aa24.06■■□□□ 1.44
TRIM39-210ENST00000440271 AMHP03971 560 aa24.06■■□□□ 1.44
TRIM39-210ENST00000440271 SSTR3P32745 418 aaPredicted RBP24.06■■□□□ 1.44
TRIM39-210ENST00000440271 PTCRAQ6ISU1 281 aaPredicted RBP24.06■■□□□ 1.44
TRIM39-210ENST00000440271 FBXO11Q86XK2 927 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms