RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 LARP4BQ92615 738 aaKnown RBP16.89■□□□□ 0.29
CPSF7-205ENST00000439958 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 CCSER1Q9C0I3 900 aa16.89■□□□□ 0.29
CPSF7-205ENST00000439958 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 AMPD3Q01432 767 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 VGLL4Q14135 290 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 NCAPHQ15003 741 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 MUM1L1Q5H9M0 696 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 PPP4R3AQ6IN85 833 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 KCNK18Q7Z418 384 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
CPSF7-205ENST00000439958 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.29
CPSF7-205ENST00000439958 NELFBQ8WX92 580 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 MMTAG2Q9BU76 263 aaKnown RBP16.88■□□□□ 0.29
CPSF7-205ENST00000439958 RMND1Q9NWS8 449 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 TPH2Q8IWU9 490 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 TRERF1Q96PN7 1200 aa16.88■□□□□ 0.29
CPSF7-205ENST00000439958 COL2A1P02458 1487 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-205ENST00000439958 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-205ENST00000439958 FCER1AP12319 257 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 EPHX2P34913 555 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 USP11P51784 963 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 GRB10Q13322 594 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 STIM1Q13586 685 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-205ENST00000439958 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 GAS7O60861 476 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 LRRC41Q15345 812 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 EHMT1Q9H9B1 1298 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 ICAM1P05362 532 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 ECM1Q16610 540 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 RNF146Q9NTX7 359 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
CPSF7-205ENST00000439958 PRCPP42785 496 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
CPSF7-205ENST00000439958 PAK1Q13153 545 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 CTTNQ14247 550 aaKnown RBP16.86■□□□□ 0.29
CPSF7-205ENST00000439958 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 MSH4O15457 936 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 TPM3P06753 285 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 SREBF1P36956 1147 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 RPS6P62753 249 aaKnown RBP16.86■□□□□ 0.29
CPSF7-205ENST00000439958 SH3RF1Q7Z6J0 888 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 PIGOQ8TEQ8 1089 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 RIPK3Q9Y572 518 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 MAEAQ7L5Y9 396 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 SLFN12Q8IYM2 578 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
CPSF7-205ENST00000439958 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
CPSF7-205ENST00000439958 NAP1L4Q99733 375 aaKnown RBP16.86■□□□□ 0.29
CPSF7-205ENST00000439958 POLR2AP24928 1970 aaKnown RBP16.85■□□□□ 0.29
CPSF7-205ENST00000439958 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
CPSF7-205ENST00000439958 MAP1SQ66K74 1059 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-205ENST00000439958 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 VPS16Q9H269 839 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 IKBKBO14920 756 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 GPBP1Q86WP2 473 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 IL31RAQ8NI17 732 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 DDX12PQ92771 950 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
CPSF7-205ENST00000439958 MYMKA6NI61 221 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 PYCARDQ9ULZ3 195 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 VWA5AO00534 786 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 PSMA7O14818 248 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 ARP10275 920 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 MMP14P50281 582 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 MED24O75448 989 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 POTEJP0CG39 1038 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 MAP3K10Q02779 954 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 STK4Q13043 487 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
CPSF7-205ENST00000439958 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
CPSF7-205ENST00000439958 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.29
CPSF7-205ENST00000439958 IRX3P78415 501 aaPredicted RBP16.83■□□□□ 0.29
CPSF7-205ENST00000439958 CEP55Q53EZ4 464 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms