RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SH3RF1Q7Z6J0 888 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 KIF2CQ99661 725 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 PSTPIP2Q9H939 334 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 ATP11BQ9Y2G3 1177 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 SCN10AQ9Y5Y9 1956 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 LARGE1O95461 756 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 AK2P54819 239 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 TLE2Q04725 743 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 STK3Q13188 491 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 PFKFB3Q16875 520 aaPredicted RBP15.28■□□□□ 0.04
LINC00399-201ENST00000439008 C1orf53Q5VUE5 145 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 ZNF274Q96GC6 653 aaPredicted RBP15.28■□□□□ 0.04
LINC00399-201ENST00000439008 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
LINC00399-201ENST00000439008 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 BARHL2Q9NY43 387 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 DDX41Q9UJV9 622 aaKnown RBP15.28■□□□□ 0.04
LINC00399-201ENST00000439008 COLQQ9Y215 455 aaPredicted RBP15.28■□□□□ 0.04
LINC00399-201ENST00000439008 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
LINC00399-201ENST00000439008 PRPF3O43395 683 aaKnown RBP15.27■□□□□ 0.04
LINC00399-201ENST00000439008 SORBS3O60504 671 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 SCG2P13521 617 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 IFNAR1P17181 557 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 ITGB8P26012 769 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 CDK7P50613 346 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 NAPAP54920 295 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 PSMC6P62333 389 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 PCSK9Q8NBP7 692 aaKnown RBP15.27■□□□□ 0.04
LINC00399-201ENST00000439008 OR6J1Q8NGC5 347 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 RIC8AQ9NPQ8 531 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 STARD7Q9NQZ5 370 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 RTEL1Q9NZ71 1219 aa15.27■□□□□ 0.04
LINC00399-201ENST00000439008 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 A6NJR5 290 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 B4DLN1 442 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 CCND2P30279 289 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 MRPL12P52815 198 aaKnown RBP15.26■□□□□ 0.03
LINC00399-201ENST00000439008 SCRN1Q12765 414 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 SLC43A3Q8NBI5 491 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
LINC00399-201ENST00000439008 AIFM3Q96NN9 605 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 INPP4AQ96PE3 977 aaPredicted RBP15.26■□□□□ 0.03
LINC00399-201ENST00000439008 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
LINC00399-201ENST00000439008 GDF15Q99988 308 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 SLC26A6Q9BXS9 759 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 SPC25Q9HBM1 224 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 PDLIM7Q9NR12 457 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
LINC00399-201ENST00000439008 ELP1O95163 1332 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 SMCO2A6NFE2 343 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 NKRFO15226 690 aaKnown RBP eCLIP15.25■□□□□ 0.03
LINC00399-201ENST00000439008 CTDNEP1O95476 244 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
LINC00399-201ENST00000439008 PURAQ00577 322 aaKnown RBP15.25■□□□□ 0.03
LINC00399-201ENST00000439008 FAAP100Q0VG06 881 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 PCNX4Q63HM2 1172 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 CUL5Q93034 780 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
LINC00399-201ENST00000439008 RBM27Q9P2N5 1060 aaKnown RBP15.25■□□□□ 0.03
LINC00399-201ENST00000439008 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
LINC00399-201ENST00000439008 ARVCFO00192 962 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 EDIL3O43854 480 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 PFKFB2O60825 505 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 PQBP1O60828 265 aaKnown RBP15.24■□□□□ 0.03
LINC00399-201ENST00000439008 GH1P01241 217 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 ITGB5P18084 799 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 UBA1P22314 1058 aaKnown RBP15.24■□□□□ 0.03
LINC00399-201ENST00000439008 MAGEA10P43363 369 aaPredicted RBP15.24■□□□□ 0.03
LINC00399-201ENST00000439008 NEK4P51957 841 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 ME3Q16798 604 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 MYSM1Q5VVJ2 828 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 PPP1R18Q6NYC8 613 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 ANKRD33Q7Z3H0 272 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 NECAB1Q8N987 351 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 GLT1D1Q96MS3 346 aa15.24■□□□□ 0.03
LINC00399-201ENST00000439008 SZT2Q5T011 3432 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 A0A0U1RQG5 324 aaPredicted RBP15.23■□□□□ 0.03
LINC00399-201ENST00000439008 SPATA31C2B4DYI2 1134 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 ATP9AO75110 1047 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 MMP3P08254 477 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 MYL3P08590 195 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 ICAM3P32942 547 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 ADCY7P51828 1080 aa15.23■□□□□ 0.03
LINC00399-201ENST00000439008 MDM2Q00987 491 aaPredicted RBP15.23■□□□□ 0.03
LINC00399-201ENST00000439008 ITGA7Q13683 1181 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms