RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 ADCK5Q3MIX3 580 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 GOLGA5Q8TBA6 731 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 P3H4Q92791 437 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 CALN1Q9BXU9 219 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 IPO11Q9UI26 975 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 N4BP1O75113 896 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 PDZD8Q8NEN9 1154 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 EXT2Q93063 718 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 CFAP36Q96G28 342 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 IQCB1Q15051 598 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 HEXIM2Q96MH2 286 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 UBE2TQ9NPD8 197 aaPredicted RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 LMBRD1Q9NUN5 540 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 IREB2P48200 963 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 RWDD4Q6NW29 188 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 DSTYKQ6XUX3 929 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 HSPH1Q92598 858 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 GFPT2O94808 682 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 MAPK4P31152 587 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 RCN2Q14257 317 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 GRK7Q8WTQ7 553 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 TSKSQ9UJT2 592 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 PCDHA4Q9UN74 947 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 PDE1BQ01064 536 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 ATP6V0A1Q93050 837 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 RAB3IPQ96QF0 476 aaPredicted RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 VCXQ9H320 206 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 LMNB1P20700 586 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 MFAP3P55082 362 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 FAM71BQ8TC56 605 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 LRRC4Q9HBW1 653 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
SHPRH-206ENST00000438092 PFDN6O15212 129 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 KRT3P12035 628 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 USP14P54578 494 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 ZNF394Q53GI3 561 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 CIAPIN1Q6FI81 312 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 KIF3CO14782 793 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 EPHB1P54762 984 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 NR5A1Q13285 461 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 AOC3Q16853 763 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 LARP4BQ92615 738 aaKnown RBP11.24□□□□□ -0.61
SHPRH-206ENST00000438092 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 SASH1O94885 1247 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 MECOMQ03112 1051 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 KCTD16Q68DU8 428 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 SEMA3EO15041 775 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 NVLO15381 856 aaKnown RBP11.24□□□□□ -0.61
SHPRH-206ENST00000438092 XPOTO43592 962 aaKnown RBP11.24□□□□□ -0.61
SHPRH-206ENST00000438092 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
SHPRH-206ENST00000438092 ANXA13P27216 316 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 IFNAR2P48551 515 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 BRD3Q15059 726 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 LMNTD2Q8IXW0 634 aa11.24□□□□□ -0.61
SHPRH-206ENST00000438092 PFKFB2O60825 505 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 CFAP43Q8NDM7 1665 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 H0YCG3 227 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 MYO1FO00160 1098 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 SNAP23O00161 211 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 TUBBP07437 444 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 SMAD1Q15797 465 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 MRPL46Q9H2W6 279 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 ZWILCHQ9H900 591 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 HACD3Q9P035 362 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 TBK1Q9UHD2 729 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 MX2P20592 715 aa11.23□□□□□ -0.61
SHPRH-206ENST00000438092 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
SHPRH-206ENST00000438092 SERPINB6P35237 376 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms