RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 TRIM37O94972 964 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 SLC1A4P43007 532 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 EIF6P56537 245 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CCDC122Q5T0U0 273 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 JAKMIP2Q96AA8 810 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CEP63Q96MT8 703 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 FHOD1Q9Y613 1164 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CYP3A7-CYP3A51PA0A087WV96 503 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 IDEP14735 1019 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CYP3A7P24462 503 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 HNRNPH3P31942 346 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 KIF5AQ12840 1032 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CERKLQ49MI3 558 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CCDC70Q6NSX1 233 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 MSL3Q8N5Y2 521 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 KIAA0895Q8NCT3 520 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 NDST4Q9H3R1 872 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
RBFOX1-205ENST00000436368 COL2A1P02458 1487 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 FCER1AP12319 257 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 DOK7Q18PE1 504 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 SUPT20HQ8NEM7 779 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 DDX12PQ92771 950 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 PARD6BQ9BYG5 372 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 PRDM10Q9NQV6 1147 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-205ENST00000436368 PLSCR1O15162 318 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 SCNN1DP51172 638 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 UBE2SQ16763 222 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 MAP9Q49MG5 647 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 ZNF771Q7L3S4 317 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 LRRC15Q8TF66 581 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 AMNQ9BXJ7 453 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 SEMA6BQ9H3T3 888 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 NHEJ1Q9H9Q4 299 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 RAB21Q9UL25 225 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 GUCA1BQ9UMX6 200 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
RBFOX1-205ENST00000436368 PITPNM2Q9BZ72 1349 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 POTEMA6NI47 508 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 USP17L10C9JJH3 530 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 ENTPD3O75355 529 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 VAV2P52735 878 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 ICA1Q05084 483 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 CDC37Q16543 378 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 MIIPQ5JXC2 388 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 NEK11Q8NG66 645 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 MBOAT7Q96N66 472 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 ALS2CR12Q96Q35 445 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 CHP1Q99653 195 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 ANO3Q9BYT9 981 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 IRX2Q9BZI1 471 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 DEF6Q9H4E7 631 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-205ENST00000436368 TACC1O75410 805 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 KRT18P05783 430 aaKnown RBP17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 RBM5P52756 815 aaKnown RBP eCLIP17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 EHHADHQ08426 723 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 COASYQ13057 564 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 CCDC40Q4G0X9 1142 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 GRIPAP1Q4V328 841 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 HDXQ7Z353 690 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 TRIM58Q8NG06 486 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 PUF60Q9UHX1 559 aaKnown RBP17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 PLAGL2Q9UPG8 496 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 MYH8P13535 1937 aa17.43■□□□□ 0.38
RBFOX1-205ENST00000436368 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 H0YIN7 160 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 RNF225M0QZC1 329 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 AMPD2Q01433 879 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 TERF2Q15554 542 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 PAPD7Q5XG87 772 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 TATDN1Q6P1N9 297 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 WDR59Q6PJI9 974 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 TRAPPC11Q7Z392 1133 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 RUBCNQ92622 972 aa17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 SECISBP2LQ93073 1101 aaKnown RBP17.42■□□□□ 0.38
RBFOX1-205ENST00000436368 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms