RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 DGKDQ16760 1214 aa17.7■□□□□ 0.42
NELFE-204ENST00000436289 FAM117BQ6P1L5 589 aa17.7■□□□□ 0.42
NELFE-204ENST00000436289 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
NELFE-204ENST00000436289 DHX38Q92620 1227 aaKnown RBP17.7■□□□□ 0.42
NELFE-204ENST00000436289 EDAQ92838 391 aa17.7■□□□□ 0.42
NELFE-204ENST00000436289 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
NELFE-204ENST00000436289 MMP3P08254 477 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 IRS1P35568 1242 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 RPS6P62753 249 aaKnown RBP17.69■□□□□ 0.42
NELFE-204ENST00000436289 SMAD2Q15796 467 aaKnown RBP17.69■□□□□ 0.42
NELFE-204ENST00000436289 TCEAL5Q5H9L2 206 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 COPS5Q92905 334 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 NAPBQ9H115 298 aa17.69■□□□□ 0.42
NELFE-204ENST00000436289 PTPRSQ13332 1948 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 NOVP48745 357 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 PPARAQ07869 468 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 SYDE2Q5VT97 1194 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 CLEC4DQ8WXI8 215 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 KAT2BQ92831 832 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 CLDND1Q9NY35 253 aa17.68■□□□□ 0.42
NELFE-204ENST00000436289 RB1P06400 928 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 ZNF618Q5T7W0 954 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 TMEM192Q8IY95 271 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 EMID1Q96A84 441 aaPredicted RBP17.67■□□□□ 0.42
NELFE-204ENST00000436289 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 YME1L1Q96TA2 773 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 LMAN2LQ9H0V9 348 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 WDR19Q8NEZ3 1342 aa17.67■□□□□ 0.42
NELFE-204ENST00000436289 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
NELFE-204ENST00000436289 CTC1Q2NKJ3 1217 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
NELFE-204ENST00000436289 FBXO11Q86XK2 927 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 RNF135Q8IUD6 432 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
NELFE-204ENST00000436289 DBF4BQ8NFT6 615 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 TOP1MTQ969P6 601 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 IWS1Q96ST2 819 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 RWDD3Q9Y3V2 267 aa17.66■□□□□ 0.42
NELFE-204ENST00000436289 LCTP09848 1927 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 RSPH10B2B2RC85 870 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 ARIH2O95376 493 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 RSPH10BP0C881 870 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 SLC16A2P36021 539 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 PSEN2P49810 448 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 TCTN1Q2MV58 587 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
NELFE-204ENST00000436289 TRAF7Q6Q0C0 670 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 PANK1Q8TE04 598 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
NELFE-204ENST00000436289 PBXIP1Q96AQ6 731 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 ZBTB40Q9NUA8 1239 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 MUTYHQ9UIF7 546 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 TRIOO75962 3097 aa17.65■□□□□ 0.42
NELFE-204ENST00000436289 PPFIA4O75335 1185 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 LTBRP36941 435 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 SMAD4Q13485 552 aaKnown RBP17.64■□□□□ 0.41
NELFE-204ENST00000436289 MFSD10Q14728 455 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 STXBP2Q15833 593 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 PLEKHG4Q58EX7 1191 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 TRIM67Q6ZTA4 783 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 RPAINQ86UA6 219 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 PRSS33Q8NF86 280 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 SEPT8Q92599 483 aa17.64■□□□□ 0.41
NELFE-204ENST00000436289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
NELFE-204ENST00000436289 ZFHX2Q9C0A1 2572 aaPredicted RBP17.63■□□□□ 0.41
NELFE-204ENST00000436289 PTPRZ1P23471 2315 aaPredicted RBP17.63■□□□□ 0.41
NELFE-204ENST00000436289 C5orf67F2Z3F1 127 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 M0R2C6 588 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 HAS3O00219 553 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 MBTPS2O43462 519 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 RANBP6O60518 1105 aaKnown RBP17.63■□□□□ 0.41
NELFE-204ENST00000436289 F2P00734 622 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
NELFE-204ENST00000436289 MBTPS1Q14703 1052 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 KIAA0753Q2KHM9 967 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 SEPT14Q6ZU15 432 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 DHX37Q8IY37 1157 aaKnown RBP17.63■□□□□ 0.41
NELFE-204ENST00000436289 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 PHOX2BQ99453 314 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
NELFE-204ENST00000436289 C11orf84Q9BUA3 381 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms