RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 LRRC47Q8N1G4 583 aaKnown RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 CEP19Q96LK0 163 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ACCSQ96QU6 501 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 VPS39Q96JC1 886 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 MYL3P08590 195 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 TSPY1Q01534 308 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 EYA1Q99502 592 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 DENND3A2RUS2 1198 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ARL4DP49703 201 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 VPS41P49754 854 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 PAPOLAP51003 745 aaKnown RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 SPATA17Q96L03 361 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 XDHP47989 1333 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 BTDP43251 543 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PATL1Q86TB9 770 aaKnown RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PSMB7Q99436 277 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 NFE2L3Q9Y4A8 694 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 RNF168Q8IYW5 571 aaPredicted RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PHKBQ93100 1093 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF594Q96JF6 807 aaPredicted RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 EPAS1Q99814 870 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 USP17L21D6R901 530 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 LRRC31Q6UY01 552 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 TCP11Q8WWU5 503 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 JRKLQ9Y4A0 524 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 KRT87PA6NCN2 255 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF263O14978 683 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 DDAH1O94760 285 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PSAPP07602 524 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 TAC1P20366 129 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 STAT2P52630 851 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
SCN4A-201ENST00000435607 RAD51Q06609 339 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 YEATS2Q9ULM3 1422 aa12.12□□□□□ -0.47
SCN4A-201ENST00000435607 RNF207Q6ZRF8 634 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 TRIM67Q6ZTA4 783 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 OR8K1Q8NGG5 319 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 RASSF4Q9H2L5 321 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 SELENONQ9NZV5 590 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 FAF1Q9UNN5 650 aaPredicted RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 DOLKQ9UPQ8 538 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 TTLL1O95922 423 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 ADAM9Q13443 819 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 RTKN2Q8IZC4 609 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 LAD1O00515 517 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 IL9RQ01113 521 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 EXOC3L4Q17RC7 722 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 HACD3Q9P035 362 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 A1BGP04217 495 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 ZSCAN32Q9NX65 697 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 STX18Q9P2W9 335 aaKnown RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 KRT40Q6A162 431 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 DSCC1Q9BVC3 393 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 MOCS3O95396 460 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 H2AFZP0C0S5 128 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 SNX1Q13596 522 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 VEPH1Q14D04 833 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
SCN4A-201ENST00000435607 H2AFVQ71UI9 128 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
SCN4A-201ENST00000435607 KCNA6P17658 529 aa12.1□□□□□ -0.47
SCN4A-201ENST00000435607 ART3Q13508 389 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms