RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 STXBP2Q15833 593 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 DGKDQ16760 1214 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 ZNF589Q86UQ0 364 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 C7orf31Q8N865 590 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 SYTL5Q8TDW5 730 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 LMCD1Q9NZU5 365 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 COL20A1Q9P218 1284 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 ABHD14A-ACY1A0A1B0GW23 586 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 NBNO60934 754 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 PCP11498 1178 aaKnown RBP13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 PSEN2P49810 448 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 MCF2L2Q86YR7 1114 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 ESR2Q92731 530 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 TGS1Q96RS0 853 aaKnown RBP13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 RAD9AQ99638 391 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 BDP1A6H8Y1 2624 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 KIAA1217Q5T5P2 1943 aa13.57□□□□□ -0.24
CHRNA1-207ENST00000435083 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 GJB5O95377 273 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 CXCL10P02778 98 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 RBL2Q08999 1139 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 IKBKEQ14164 716 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 PNMA1Q8ND90 353 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-207ENST00000435083 REV3LO60673 3130 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 NEDD4P46934 1319 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 ERVK-21P61565 698 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 PTK7Q13308 1070 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 MFSD10Q14728 455 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 KIAA0753Q2KHM9 967 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 KATNAL1Q9BW62 490 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 MAF1Q9H063 256 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 KAT14Q9H8E8 782 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 MRPL11Q9Y3B7 192 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
CHRNA1-207ENST00000435083 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 ZNF213O14771 459 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 EFCAB14O75071 495 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 CFBP00751 764 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 NR3C2P08235 984 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 ZNF286BP0CG31 522 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 LAMC2Q13753 1193 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 MYH6P13533 1939 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 SORBS3O60504 671 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 GPR37L1O60883 481 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 KDM4AO75164 1064 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 TICAM2Q86XR7 235 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 WNT8BQ93098 351 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 PXMP2Q9NR77 195 aa13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-207ENST00000435083 SIP14410 1827 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 HAS3O00219 553 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 LGR5O75473 907 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 F2P00734 622 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 MYCLP12524 364 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 KCNA5P22460 613 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
CHRNA1-207ENST00000435083 EMID1Q96A84 441 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms