RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 VSIG10LQ86VR7 867 aa25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 FANCBQ8NB91 859 aa25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 AFG1LQ8WV93 481 aa25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 ALDH8A1Q9H2A2 487 aaPredicted RBP25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 DOCK5Q9H7D0 1870 aa25.59■■□□□ 1.69
SEMA3B-205ENST00000434030 TRIP12Q14669 1992 aaPredicted RBP25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 RGS20O76081 388 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 Q7L0L9 218 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 DEFB123Q8N688 67 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 IL31RAQ8NI17 732 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 TCEANC2Q96MN5 208 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 SEC63Q9UGP8 760 aaKnown RBP25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 MRVI1Q9Y6F6 885 aa25.58■■□□□ 1.69
SEMA3B-205ENST00000434030 CYP2C18P33260 490 aa25.57■■□□□ 1.68
SEMA3B-205ENST00000434030 KRT32Q14532 448 aa25.57■■□□□ 1.68
SEMA3B-205ENST00000434030 NBPF20Q3BBV1 942 aa25.57■■□□□ 1.68
SEMA3B-205ENST00000434030 TMEM199Q8N511 208 aa25.57■■□□□ 1.68
SEMA3B-205ENST00000434030 HIPK3Q9H422 1215 aa25.57■■□□□ 1.68
SEMA3B-205ENST00000434030 MMP3P08254 477 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 CSF2RAP15509 400 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 CCND2P30279 289 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 PPIGQ13427 754 aaKnown RBP eCLIP25.56■■□□□ 1.688e-11■■□□□ 13.2
SEMA3B-205ENST00000434030 APOA5Q6Q788 366 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 SYNE3Q6ZMZ3 975 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 MICU3Q86XE3 530 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 CCDC82Q8N4S0 544 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 KCNB2Q92953 911 aa25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 RNPC3Q96LT9 517 aaKnown RBP25.56■■□□□ 1.68
SEMA3B-205ENST00000434030 SCN5AQ14524 2016 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 NFRKBQ6P4R8 1299 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 TMTC3Q6ZXV5 915 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 C16orf59Q7L2K0 433 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 PPP1R13LQ8WUF5 828 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 EMID1Q96A84 441 aaPredicted RBP25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 ZFP91Q96JP5 570 aaPredicted RBP25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.55■■□□□ 1.682e-11■■□□□ 14.4
SEMA3B-205ENST00000434030 NOC4LQ9BVI4 516 aaKnown RBP25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 TRMT13Q9NUP7 481 aaKnown RBP25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 UMODL1Q5DID0 1318 aa25.55■■□□□ 1.68
SEMA3B-205ENST00000434030 LAMC2Q13753 1193 aa25.54■■□□□ 1.68
SEMA3B-205ENST00000434030 KCNV1Q6PIU1 500 aa25.54■■□□□ 1.68
SEMA3B-205ENST00000434030 USP17L6PQ6QN14 398 aa25.54■■□□□ 1.68
SEMA3B-205ENST00000434030 BRPF3Q9ULD4 1205 aa25.54■■□□□ 1.68
SEMA3B-205ENST00000434030 FRMPD4Q14CM0 1322 aa25.54■■□□□ 1.68
SEMA3B-205ENST00000434030 hCG_1642624A0A1W2PR95 340 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 MEIS2O14770 477 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 HMGB1P09429 215 aaKnown RBP25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 SUPT20HL2P0C7V6 817 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 CASTP20810 708 aaKnown RBP25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 FAM47CQ5HY64 1035 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 TMEM240Q5SV17 173 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 FAM109BQ6ICB4 259 aaPredicted RBP25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 DHX37Q8IY37 1157 aaKnown RBP25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 SMARCC2Q8TAQ2 1214 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 CUL5Q93034 780 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 MTMR10Q9NXD2 777 aa25.53■■□□□ 1.68
SEMA3B-205ENST00000434030 PIK3CDO00329 1044 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 ACRP10323 421 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 TGFB3P10600 412 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 HSPA4P34932 840 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 MRPS9P82933 396 aaKnown RBP25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 SMAD3P84022 425 aaKnown RBP25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 SP2Q02086 613 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 PTPN11Q06124 597 aaPredicted RBP25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 DGKDQ16760 1214 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 KAT2BQ92831 832 aa25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 GPKOWQ92917 476 aaPredicted RBP eCLIP25.52■■□□□ 1.68
SEMA3B-205ENST00000434030 ZBTB43O43298 467 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 CYP2C9P11712 490 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 CCL23P55773 120 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 CELF3Q5SZQ8 465 aaKnown RBP25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 MYSM1Q5VVJ2 828 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 PPTC7Q8NI37 304 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 IL23AQ9NPF7 189 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 RBM28Q9NW13 759 aaKnown RBP25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 SNX14Q9Y5W7 946 aa25.51■■□□□ 1.67
SEMA3B-205ENST00000434030 CPA1P15085 419 aa25.5■■□□□ 1.67
SEMA3B-205ENST00000434030 CHMP4BP1P59074 171 aa25.5■■□□□ 1.67
SEMA3B-205ENST00000434030 ZNF365Q70YC5 407 aa25.5■■□□□ 1.67
SEMA3B-205ENST00000434030 WNT8AQ9H1J5 351 aa25.5■■□□□ 1.67
SEMA3B-205ENST00000434030 PSTPIP2Q9H939 334 aa25.5■■□□□ 1.67
SEMA3B-205ENST00000434030 GBF1Q92538 1859 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 CNTNAP5Q8WYK1 1306 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 SORBS3O60504 671 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 STAM2O75886 525 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 REC8O95072 547 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 GGPS1O95749 300 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 RTN1Q16799 776 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 JAKMIP1Q96N16 626 aaKnown RBP25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 INPP4AQ96PE3 977 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 RTEL1Q9NZ71 1219 aa25.49■■□□□ 1.67
SEMA3B-205ENST00000434030 KLF18A0A0U1RQI7 1052 aa25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 UBA1P22314 1058 aaKnown RBP25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 ICAM3P32942 547 aa25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 FUT2Q10981 343 aa25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 HSDL1Q3SXM5 330 aa25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 PSRC1Q6PGN9 363 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 FAM217BQ9NTX9 383 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 TANC1Q9C0D5 1861 aa25.48■■□□□ 1.67
SEMA3B-205ENST00000434030 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms