RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 VIMP08670 466 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CCNA1P78396 465 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PDZD4Q76G19 769 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 NT5DC4Q86YG4 428 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MFN1Q8IWA4 741 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MYOCDQ8IZQ8 938 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 VCX3BQ9H321 246 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 NDE1Q9NXR1 346 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PLAGL2Q9UPG8 496 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 COL16A1Q07092 1604 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MYO5AQ9Y4I1 1855 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 TPRP12270 2363 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MPHOSPH10O00566 681 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 GNPATO15228 680 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 WEE2P0C1S8 567 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 SLC26A2P50443 739 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 DEUP1Q05D60 604 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 NBPF20Q3BBV1 942 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 FRMD5Q7Z6J6 570 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 C7orf25Q9BPX7 421 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC9Q9Y3X0 531 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 A0A0A6YYK5 440 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MFAP3LO75121 409 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 LUC7L3O95232 432 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CEBPAP49715 358 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 EFNA5P52803 228 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MUM1L1Q5H9M0 696 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 G2E3Q7L622 706 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CSGALNACT2Q8N6G5 542 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MAGEB6Q8N7X4 407 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PI4KBQ9UBF8 816 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PASKQ96RG2 1323 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PGRMC1O00264 195 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PTCD1O75127 700 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 IL1R1P14778 569 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 HOXB8P17481 243 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 DNAJB2P25686 324 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 POLD1P28340 1107 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CLCN6P51797 869 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 NFIL3Q16649 462 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 C6orf163Q5TEZ5 329 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 ZSCAN29Q8IWY8 852 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 ATL2Q8NHH9 583 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 DDX54Q8TDD1 881 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CARD9Q9H257 536 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 DNM3Q9UQ16 869 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PARP3Q9Y6F1 533 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 BAZ2AQ9UIF9 1905 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 STXBP3O00186 592 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PODXLO00592 558 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 ECM2O94769 699 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 BMT2Q1RMZ1 405 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 SFMBT2Q5VUG0 894 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 VGLL2Q8N8G2 317 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 GPATCH11Q8N954 259 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 POLR3CQ9BUI4 534 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 BTAF1O14981 1849 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 TAF1LQ8IZX4 1826 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 A0A0G2JS52 829 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CALB1P05937 261 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 KCNA4P22459 653 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 SEL1L2Q5TEA6 688 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 C11orf63Q6NUN7 778 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 OTUD6AQ7L8S5 288 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 FAM83AQ86UY5 434 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 UVRAGQ9P2Y5 699 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 RPN1P04843 607 aaKnown RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 ATF7P17544 494 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF76P36508 570 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 UBXN1Q04323 297 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 TOB2Q14106 344 aaPredicted RBP4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CDKAL1Q5VV42 579 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 HACE1Q8IYU2 909 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 PFDN4Q9NQP4 134 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 MID2Q9UJV3 735 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 SLC8A1P32418 973 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC122Q5T0U0 273 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC186Q7Z3E2 898 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 AOPEPQ8N6M6 819 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 GPT2Q8TD30 523 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 FBF1Q8TES7 1133 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 FRMPD4Q14CM0 1322 aa4.13□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC189A1A4V9 331 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 H0YHG0 523 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CYP2C19P33261 490 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 MCAMP43121 646 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 DHX34Q14147 1143 aaKnown RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 STRIP1Q5VSL9 837 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 C8orf74Q6P047 294 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 CD302Q8IX05 232 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 DCP1AQ9NPI6 582 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 GPR75-ASB3A0A0A6YYF3 556 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 IRX1P78414 480 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 MAP3K9P80192 1104 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 LAMB3Q13751 1172 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 EAPPQ56P03 285 aaPredicted RBP4.12□□□□□ -1.75
SHPRH-205ENST00000433355 FAM26FQ5R3K3 315 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 VCPIP1Q96JH7 1222 aa4.12□□□□□ -1.75
SHPRH-205ENST00000433355 IKBKGQ9Y6K9 419 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms