RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TNIP3Q96KP6 325 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TRIM55Q9BYV6 548 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 NUF2Q9BZD4 464 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ACAD9Q9H845 621 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 PARVGQ9HBI0 331 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TRPV5Q9NQA5 729 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 PCDHGB5Q9Y5G0 923 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 GOLGA8QA0A0J9YX86 632 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 GOLGA8AA7E2F4 631 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 F6X3S4 739 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 C21orf2O43822 256 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 CLTBP09497 229 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 HMOX1P09601 288 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 HSD3B2P26439 372 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 WEE1P30291 646 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TCF7P36402 384 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 APOBRQ0VD83 1088 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TBL3Q12788 808 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 LAMC2Q13753 1193 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 PKN2Q16513 984 aaKnown RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 KMT5BQ4FZB7 885 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ITPRIPL1Q6GPH6 555 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 STX12Q86Y82 276 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ENAHQ8N8S7 591 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 IPMKQ8NFU5 416 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 CNDP1Q96KN2 507 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 ATP6V1G3Q96LB4 118 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 FAM8A1Q9UBU6 413 aa5.86□□□□□ -1.47
PTPN4-203ENST00000430976 TTC7AQ9ULT0 858 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-203ENST00000430976 SNX4O95219 450 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 HOXD12P35452 270 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 MRPS15P82914 257 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ZER1Q7Z7L7 766 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC33Q8N5R6 958 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 MKNK1Q9BUB5 465 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 HERC2P3Q9BVR0 1158 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 APOL5Q9BWW9 433 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CARD11Q9BXL7 1154 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 TEX12Q9BXU0 123 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 DDX19BQ9UMR2 479 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 EFR3BQ9Y2G0 817 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PALM3A6NDB9 673 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ENC1O14682 589 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 SPTLC1O15269 473 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ACTN4O43707 911 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CYTH3O43739 400 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 TBC1D12O60347 775 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 RNF40O75150 1001 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PRLP01236 227 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ETFBP38117 255 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CCR3P51677 355 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PLTPP55058 493 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ADAM17P78536 824 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PTK2Q05397 1052 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CTDSPL2Q05D32 466 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PPFIA1Q13136 1202 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC83Q8IWF9 413 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANKRD35Q8N283 1001 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 SEPT1Q8WYJ6 367 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 HOOK2Q96ED9 719 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ACAT2Q9BWD1 397 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANTXR1Q9H6X2 564 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 OLA1Q9NTK5 396 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 FBXL21Q9UKT6 434 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 AGTPBP1Q9UPW5 1226 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ATP11BQ9Y2G3 1177 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PCDHB13Q9Y5F0 798 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 AP1M2Q9Y6Q5 423 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CGNL1Q0VF96 1302 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 LRRD1A4D1F6 860 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CTAGE9A4FU28 777 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 H3BRJ5 948 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 M0QX08 132 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PHACTR2O75167 634 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 GUCY1B2O75343 617 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 LCA5LO95447 670 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CNTFP26441 200 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 HSD17B2P37059 387 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 IGHMBP2P38935 993 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ROR2Q01974 943 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CYP26C1Q6V0L0 522 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 HDAC7Q8WUI4 952 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 TBC1D22BQ9NU19 505 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 IFT80Q9P2H3 777 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 MTRRQ9UBK8 725 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CHMP2BQ9UQN3 213 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 TMED5Q9Y3A6 229 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 SCAMP3O14828 347 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 LARGE1O95461 756 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 SLC8A3P57103 927 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 RPP30P78346 268 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 PLD1Q13393 1074 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 RAB3GAP1Q15042 981 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANKRD20A8PQ5CZ79 823 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANKRD20A2Q5SQ80 823 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANKRD20A3Q5VUR7 823 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms