RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
ATG4B-210ENST00000428861 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
ATG4B-210ENST00000428861 LAMA3Q16787 3333 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 STXBP3O00186 592 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PQBP1O60828 265 aaKnown RBP12.38□□□□□ -0.43
ATG4B-210ENST00000428861 CDK7P50613 346 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PSMC6P62333 389 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 SP2Q02086 613 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 ARHGAP1Q07960 439 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 TTLL4Q14679 1199 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PKN1Q16512 942 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PHKBQ93100 1093 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 GDF15Q99988 308 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 BCAS3Q9H6U6 928 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 PDLIM7Q9NR12 457 aa12.38□□□□□ -0.43
ATG4B-210ENST00000428861 ELP1O95163 1332 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 B4DLN1 442 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 SORBS3O60504 671 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 DTNBO60941 627 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
ATG4B-210ENST00000428861 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
ATG4B-210ENST00000428861 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-210ENST00000428861 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 SEMA3FQ13275 785 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 HABP4Q5JVS0 413 aaKnown RBP12.37□□□□□ -0.43
ATG4B-210ENST00000428861 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 SMARCC2Q8TAQ2 1214 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 PRDM5Q9NQX1 630 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-210ENST00000428861 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 TELO2Q9Y4R8 837 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 TRIOBPQ9H2D6 2365 aa12.37□□□□□ -0.43
ATG4B-210ENST00000428861 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-210ENST00000428861 A6NJR5 290 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 ARVCFO00192 962 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATG4B-210ENST00000428861 MYL3P08590 195 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 CCND2P30279 289 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 NAPAP54920 295 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 PFKFB3Q16875 520 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-210ENST00000428861 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 VTI1AQ96AJ9 217 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 PGBD1Q96JS3 809 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
ATG4B-210ENST00000428861 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
ATG4B-210ENST00000428861 GH1P01241 217 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 MMP3P08254 477 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 CLTBP09497 229 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 SCG2P13521 617 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
ATG4B-210ENST00000428861 ANAPC15P60006 121 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 STK3Q13188 491 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 ITGA7Q13683 1181 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 FAM126BQ8IXS8 530 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 CUL5Q93034 780 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 TOX2Q96NM4 488 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-210ENST00000428861 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
ATG4B-210ENST00000428861 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 KIAA0355O15063 1070 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 ZEB2O60315 1214 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 CD4P01730 458 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 IFNAR1P17181 557 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 BMP8BP34820 402 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
ATG4B-210ENST00000428861 CPT1AP50416 773 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 AK2P54819 239 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 SCRN1Q12765 414 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 MYSM1Q5VVJ2 828 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 PPP1R18Q6NYC8 613 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 KAT2BQ92831 832 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 BADQ92934 168 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-210ENST00000428861 ZNF274Q96GC6 653 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-210ENST00000428861 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 TBX21Q9UL17 535 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
ATG4B-210ENST00000428861 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 B4GALT4O60513 344 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 ATP9AO75110 1047 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 CABYRO75952 493 aa12.33□□□□□ -0.44
ATG4B-210ENST00000428861 LARGE1O95461 756 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms