RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 DDX25Q9UHL0 483 aaKnown RBP14.19□□□□□ -0.14
TRIM39-207ENST00000428404 SRPRBQ9Y5M8 271 aaKnown RBP14.19□□□□□ -0.14
TRIM39-207ENST00000428404 UBIAD1Q9Y5Z9 338 aa14.19□□□□□ -0.14
TRIM39-207ENST00000428404 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
TRIM39-207ENST00000428404 RBBP6Q7Z6E9 1792 aaKnown RBP14.19□□□□□ -0.14
TRIM39-207ENST00000428404 LOC102724159A0A0B4J2E5 919 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 SLC15A5A6NIM6 579 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 CUTAO60888 179 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 COBLO75128 1261 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 PGK2P07205 417 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 NR3C2P08235 984 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ADORA2AP29274 412 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ME1P48163 572 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 UBXN2AP68543 259 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 PWP2Q15269 919 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ZNF792Q3KQV3 632 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 MORN1Q5T089 497 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 WDR78Q5VTH9 848 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ADALQ6DHV7 355 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 CCAR1Q8IX12 1150 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 KRI1Q8N9T8 703 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 MORC4Q8TE76 937 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 HAS1Q92839 578 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 FERMT2Q96AC1 680 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
TRIM39-207ENST00000428404 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
TRIM39-207ENST00000428404 THSD7BQ9C0I4 1608 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 A0A1W2PQ27 194 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 A0A1W2PQ64 194 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 A0A1W2PQD8 194 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 TBX3O15119 743 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 OR52Z1P0C646 297 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 ITGB5P18084 799 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 CCND2P30279 289 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 ZNF76P36508 570 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 ALDH5A1P51649 535 aaPredicted RBP14.17□□□□□ -0.14
TRIM39-207ENST00000428404 UBE2HP62256 183 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 PRR16Q569H4 304 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 ETNPPLQ8TBG4 499 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 USP6NLQ92738 828 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 JADE2Q9NQC1 790 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 DIS3Q9Y2L1 958 aaKnown RBP14.17□□□□□ -0.14
TRIM39-207ENST00000428404 IVNS1ABPQ9Y6Y0 642 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 LCTP09848 1927 aa14.17□□□□□ -0.14
TRIM39-207ENST00000428404 MSH4O15457 936 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 STAM2O75886 525 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 PTMSP20962 102 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 CMA1P23946 247 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 GRIN1Q05586 938 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 CALCRLQ16602 461 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
TRIM39-207ENST00000428404 FAM20AQ96MK3 541 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 CLIC6Q96NY7 704 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
TRIM39-207ENST00000428404 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
TRIM39-207ENST00000428404 FAM237AA0A1B0GTK4 181 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 B4DLN1 442 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 TRPA1O75762 1119 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 EIF3JO75822 258 aaKnown RBP14.15□□□□□ -0.14
TRIM39-207ENST00000428404 RGS20O76081 388 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 HOXC6P09630 235 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-207ENST00000428404 CTGFP29279 349 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 SETQ01105 290 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-207ENST00000428404 STXBP2Q15833 593 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 SHC4Q6S5L8 630 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 DTHD1Q6ZMT9 781 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 PLA2G4DQ86XP0 818 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-207ENST00000428404 KCNH7Q9NS40 1196 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 SAGE1Q9NXZ1 904 aa14.15□□□□□ -0.14
TRIM39-207ENST00000428404 DDX49Q9Y6V7 483 aaKnown RBP14.15□□□□□ -0.14
TRIM39-207ENST00000428404 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
TRIM39-207ENST00000428404 VWA3AA6NCI4 1184 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 MAFGO15525 162 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 ARP10275 920 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 ICAM3P32942 547 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
TRIM39-207ENST00000428404 FXR2P51116 673 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRIM39-207ENST00000428404 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-207ENST00000428404 PDIA5Q14554 519 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 RESP18Q5W5W9 173 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 MAMDC4Q6UXC1 1216 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 GPT2Q8TD30 523 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 GPRASP2Q96D09 838 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 WDR11Q9BZH6 1224 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
TRIM39-207ENST00000428404 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 ASB14A6NK59 587 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 SPATA31C2B4DYI2 1134 aa14.13□□□□□ -0.15
TRIM39-207ENST00000428404 DHX15O43143 795 aaKnown RBP14.13□□□□□ -0.15
TRIM39-207ENST00000428404 PSMD10O75832 226 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms