RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 LBHD1Q9BQE6 289 aaPredicted RBP10.68□□□□□ -0.7
RFX3-AS1-202ENST00000427722 WDR11Q9BZH6 1224 aa10.68□□□□□ -0.7
RFX3-AS1-202ENST00000427722 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
RFX3-AS1-202ENST00000427722 PDLIM7Q9NR12 457 aa10.68□□□□□ -0.7
RFX3-AS1-202ENST00000427722 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
RFX3-AS1-202ENST00000427722 PNMA6FA0A0J9YX94 578 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 B4DLN1 442 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 REC8O95072 547 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 EIF2AK2P19525 551 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 LIFRP42702 1097 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 GNAQP50148 359 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 FXR1P51114 621 aaKnown RBP eCLIP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 HSD17B4P51659 736 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TRAF1Q13077 416 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 KRT32Q14532 448 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 DUSP28Q4G0W2 176 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ARHGEF16Q5VV41 709 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 IQSEC1Q6DN90 963 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CXCL17Q6UXB2 119 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 DHX32Q7L7V1 743 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CMTR1Q8N1G2 835 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TMTC2Q8N394 836 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SCFD2Q8WU76 684 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 RRP36Q96EU6 259 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 JAKMIP1Q96N16 626 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SPZ1Q9BXG8 430 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SEC63Q9UGP8 760 aaKnown RBP10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TRIOBPQ9H2D6 2365 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 A0A0U1RQG5 324 aaPredicted RBP10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ZEB2O60315 1214 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CLTBP09497 229 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 POLR2MP0CAP2 368 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CALM1P0DP23 149 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CALM2P0DP24 149 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CALM3P0DP25 149 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 NKX3-2P78367 333 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 FGD1P98174 961 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ERICH6BQ5W0A0 696 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ADGRD1Q6QNK2 874 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SYNE3Q6ZMZ3 975 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TMTC3Q6ZXV5 915 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SRBD1Q8N5C6 995 aaKnown RBP10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 OR6J1Q8NGC5 347 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 MAF1Q9H063 256 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 PXMP2Q9NR77 195 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ELP1O95163 1332 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 hCG_1642624A0A1W2PR95 340 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TK2O00142 265 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ARIH2O95376 493 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TXNP10599 105 aaKnown RBP10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CPA1P15085 419 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 HSPA4P34932 840 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 EXOSC10Q01780 885 aaKnown RBP10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 GHRHRQ02643 423 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TTLL4Q14679 1199 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 STXBP2Q15833 593 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 FCHSD1Q86WN1 690 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 FANCBQ8NB91 859 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 IL31RAQ8NI17 732 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 COPS5Q92905 334 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 IWS1Q96ST2 819 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 Q9Y3F1 56 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
RFX3-AS1-202ENST00000427722 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MROH7Q68CQ1 1323 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 KLF18A0A0U1RQI7 1052 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TRIM43BA6NCK2 446 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GOLGA8AA7E2F4 631 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 GOLGA8BA8MQT2 603 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 DCDC2CA8MYV0 355 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ARVCFO00192 962 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 DPYSL4O14531 572 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 ZBTB43O43298 467 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CABYRO75952 493 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 NR3C2P08235 984 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MYL3P08590 195 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 BMP8BP34820 402 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 CPT1AP50416 773 aa10.64□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PSMC6P62333 389 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms