RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 LIMA1Q9UHB6 759 aaKnown RBP24.35■■□□□ 1.49
CNEP1R1-202ENST00000427478 H7C1D1 291 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 GCOM1H8Y6P7 765 aaPredicted RBP24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 POLR2MP0CAP2 368 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 ZNF76P36508 570 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 SPAG1Q07617 926 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 DGKZQ13574 1117 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 TCP11X2Q5H9J9 407 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 HYIQ5T013 277 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 CNNM4Q6P4Q7 775 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 UNC13DQ70J99 1090 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 DHTKD1Q96HY7 919 aaPredicted RBP24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 TRIM47Q96LD4 638 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 MRPL11Q9Y3B7 192 aaKnown RBP24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 POTEB3A0JP26 581 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 POTECB2RU33 542 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 TBX3O15119 743 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 CTNND1O60716 968 aaKnown RBP24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 CIITAP33076 1130 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 POTEBQ6S5H4 581 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 LDHDQ86WU2 507 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 KIAA0895Q8NCT3 520 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 NT5C3AQ9H0P0 336 aa24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 TRMT1Q9NXH9 659 aaKnown RBP24.34■■□□□ 1.49
CNEP1R1-202ENST00000427478 CCAR2Q8N163 923 aaKnown RBP24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 CCDC112Q8NEF3 446 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 ANKRD20A12PQ8NF67 263 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 CYP2W1Q8TAV3 490 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 DDX12PQ92771 950 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 TAB2Q9NYJ8 693 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 KIAA1024Q9UPX6 916 aa24.33■■□□□ 1.49
CNEP1R1-202ENST00000427478 ABCB11O95342 1321 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 WDR46O15213 610 aaKnown RBP24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 CYP3A4P08684 503 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 SPIRE1Q08AE8 756 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 NCAPH2Q6IBW4 605 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 TTI2Q6NXR4 508 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 LRRC27Q9C0I9 530 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 VPS16Q9H269 839 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 SLC39A2Q9NP94 309 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 DICER1Q9UPY3 1922 aaKnown RBP24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 PVALEFA0A1B0GWK0 134 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 COPB1P53618 953 aaKnown RBP24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 ANGEL2Q5VTE6 544 aaKnown RBP24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 LPAR1Q92633 364 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 UPF1Q92900 1129 aaKnown RBP eCLIP24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 P2RX5Q93086 422 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 KIAA1683Q9H0B3 1180 aa24.32■■□□□ 1.48
CNEP1R1-202ENST00000427478 E9PMD0 336 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 MSH4O15457 936 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 MED24O75448 989 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 SSBP05455 408 aaKnown RBP eCLIP24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 IDEP14735 1019 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 PBX1P40424 430 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 ADKP55263 362 aaKnown RBP24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 E4F1Q66K89 784 aaPredicted RBP24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 IRF2BP1Q8IU81 584 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 GTPBP4Q9BZE4 634 aaKnown RBP24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 TMX1Q9H3N1 280 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 UTRNP46939 3433 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 N4BP3O15049 544 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 TERF1P54274 439 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 UBXN2AP68543 259 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 TEX2Q8IWB9 1127 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 TC2NQ8N9U0 490 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 TRPM4Q8TD43 1214 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 AGBL1Q96MI9 1066 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 FAM20AQ96MK3 541 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 SLF1Q9BQI6 1058 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 SRRTQ9BXP5 876 aaKnown RBP24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 GINM1Q9NU53 330 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 CCPG1Q9ULG6 757 aa24.31■■□□□ 1.48
CNEP1R1-202ENST00000427478 CCNE1P24864 410 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 PPP1R2P41236 205 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 PRAMEF18Q5VWM3 479 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 HAUS3Q68CZ6 603 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 THAP9Q9H5L6 903 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 ZNF536O15090 1300 aa24.3■■□□□ 1.48
CNEP1R1-202ENST00000427478 IGLV3-22A0A075B6J6 115 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 BICDL2A1A5D9 508 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 LRRC10BA6NIK2 292 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 ICAM1P05362 532 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 TNNT1P13805 278 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 MTMR2Q13614 643 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 DCAF15Q66K64 600 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 DUSP9Q99956 384 aaKnown RBP24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 TANGO6Q9C0B7 1094 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 KCND1Q9NSA2 647 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 POTEFA5A3E0 1075 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 SLC26A4O43511 780 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 POTEIP0CG38 1075 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 KCNJ6P48051 423 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 COBLL1Q53SF7 1204 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 ANKRD40Q6AI12 368 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 POTEGQ6S5H5 508 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 POTEEQ6S8J3 1075 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 ARHGAP27Q6ZUM4 889 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 TMEM139Q8IV31 216 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 CSGALNACT2Q8N6G5 542 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 PRPF38AQ8NAV1 312 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms