RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
C9orf3-205ENST00000427193 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
C9orf3-205ENST00000427193 RECKO95980 971 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 SOX9P48436 509 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 PAK2Q13177 524 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 EEF1DP3Q658K8 133 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 CCDC81Q6ZN84 652 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 C19orf47Q8N9M1 422 aaKnown RBP8.17□□□□□ -1.1
C9orf3-205ENST00000427193 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 PREX2Q70Z35 1606 aa8.17□□□□□ -1.1
C9orf3-205ENST00000427193 A2ML1A8K2U0 1454 aa8.16□□□□□ -1.1
C9orf3-205ENST00000427193 POLR1AO95602 1720 aaPredicted RBP8.16□□□□□ -1.1
C9orf3-205ENST00000427193 MFAP1P55081 439 aaKnown RBP8.16□□□□□ -1.1
C9orf3-205ENST00000427193 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
C9orf3-205ENST00000427193 GNPTABQ3T906 1256 aa8.16□□□□□ -1.1
C9orf3-205ENST00000427193 CDC42BPAQ5VT25 1732 aa8.16□□□□□ -1.1
C9orf3-205ENST00000427193 OR6P1Q8NGX9 317 aa8.16□□□□□ -1.1
C9orf3-205ENST00000427193 GBP3Q9H0R5 595 aa8.16□□□□□ -1.1
C9orf3-205ENST00000427193 ZNF644Q9H582 1327 aaPredicted RBP8.16□□□□□ -1.1
C9orf3-205ENST00000427193 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 FBLN1P23142 703 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 TRIM26Q12899 539 aaPredicted RBP8.15□□□□□ -1.1
C9orf3-205ENST00000427193 PPP2R5DQ14738 602 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 HEATR6Q6AI08 1181 aaKnown RBP8.15□□□□□ -1.1
C9orf3-205ENST00000427193 FEZF2Q8TBJ5 459 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 RASGRP4Q8TDF6 673 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 RNF38Q9H0F5 515 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 KLHL25Q9H0H3 589 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 CFDP1Q9UEE9 299 aaPredicted RBP8.15□□□□□ -1.1
C9orf3-205ENST00000427193 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
C9orf3-205ENST00000427193 CDC42BPBQ9Y5S2 1711 aa8.15□□□□□ -1.11
C9orf3-205ENST00000427193 RNF17Q9BXT8 1623 aaKnown RBP8.14□□□□□ -1.11
C9orf3-205ENST00000427193 AURKAO14965 403 aa8.14□□□□□ -1.11
C9orf3-205ENST00000427193 GIPRP48546 466 aa8.14□□□□□ -1.11
C9orf3-205ENST00000427193 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
C9orf3-205ENST00000427193 ABCC5O15440 1437 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 SETD1AO15047 1707 aaKnown RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 F8W031 263 aaPredicted RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 PPM1BO75688 479 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 TACR1P25103 407 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 LIMS1P48059 325 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 RBM10P98175 930 aaKnown RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 SLC7A5Q01650 507 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 ERICH6BQ5W0A0 696 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 METTL16Q86W50 562 aaKnown RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 TP53I13Q8NBR0 393 aaPredicted RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 GPRASP2Q96D09 838 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 HCFC2Q9Y5Z7 792 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 ITSN2Q9NZM3 1697 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 DNMT1P26358 1616 aaKnown RBP8.13□□□□□ -1.11
C9orf3-205ENST00000427193 PTPN23Q9H3S7 1636 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 ABCC1P33527 1531 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 MED14O60244 1454 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 CAMSAP2Q08AD1 1489 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 PLEKHH2Q8IVE3 1493 aa8.13□□□□□ -1.11
C9orf3-205ENST00000427193 FAM135BQ49AJ0 1406 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 A0A1W2PQH9 124 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 ZC3H12DA2A288 527 aaKnown RBP8.12□□□□□ -1.11
C9orf3-205ENST00000427193 FFAR3O14843 346 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 GLI4P10075 376 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 PRR5P85299 388 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 ADAT2Q7Z6V5 191 aaKnown RBP8.12□□□□□ -1.11
C9orf3-205ENST00000427193 CABP7Q86V35 215 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 MCMBPQ9BTE3 642 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 SYNMO15061 1565 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 ARHGEF5Q12774 1597 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 ARHGAP5Q13017 1502 aa8.12□□□□□ -1.11
C9orf3-205ENST00000427193 NPHP4O75161 1426 aaPredicted RBP8.12□□□□□ -1.11
C9orf3-205ENST00000427193 EPHX1P07099 455 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 NCAM1P13591 858 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 FOXO4P98177 505 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 GRB10Q13322 594 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 ZDHHC14Q8IZN3 488 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 RCC1LQ96I51 464 aaKnown RBP8.11□□□□□ -1.11
C9orf3-205ENST00000427193 CGGBP1Q9UFW8 167 aaPredicted RBP8.11□□□□□ -1.11
C9orf3-205ENST00000427193 FAN1Q9Y2M0 1017 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 BACE2Q9Y5Z0 518 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 KIDINS220Q9ULH0 1771 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 DAPK1P53355 1430 aa8.11□□□□□ -1.11
C9orf3-205ENST00000427193 STXBP3O00186 592 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 ATF2P15336 505 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 SEPHS1P49903 392 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 AMPD2Q01433 879 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 ARHGEF39Q8N4T4 335 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 PCDHB10Q9UN67 800 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 ADGRL2O95490 1459 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 CLTCQ00610 1675 aaKnown RBP8.1□□□□□ -1.11
C9orf3-205ENST00000427193 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 ROCK1Q13464 1354 aa8.1□□□□□ -1.11
C9orf3-205ENST00000427193 TRBV23OR9-2A0A075B6M9 112 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 C2orf71A6NGG8 1288 aa8.09□□□□□ -1.11
C9orf3-205ENST00000427193 VAMP4O75379 141 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms