RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CHMP6Q96FZ7 201 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 NRBP2Q9NSY0 501 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 E7EWF7 191 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 FMO2Q99518 471 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 LRRC8BQ6P9F7 803 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 ZNF654Q8IZM8 581 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 MTRQ99707 1265 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 MT-ND3P03897 115 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 ARL4AP40617 200 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 TTBK2Q6IQ55 1244 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 TMEM206Q9H813 350 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 POLGP54098 1239 aaPredicted RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 TRIML2Q8N7C3 387 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 VPS39Q96JC1 886 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 SMYD2Q9NRG4 433 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 NEK9Q8TD19 979 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 MRGBPQ9NV56 204 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 AK9Q5TCS8 1911 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 ZBTB7BO15156 539 aaPredicted RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 RFX6Q8HWS3 928 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 SYCE1LA8MT33 242 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PFKFB2O60825 505 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PPARAQ07869 468 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PPM1KQ8N3J5 372 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 CDV3Q9UKY7 258 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PODXLO00592 558 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PSMC2P35998 433 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 ENOX1Q8TC92 643 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PHKBQ93100 1093 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 DPH5Q9H2P9 285 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 CPSF3Q9UKF6 684 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 GJA3Q9Y6H8 435 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 POC1B-GALNT4F8VUJ3 575 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 POLR2FP61218 127 aaKnown RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 MDM2Q00987 491 aaPredicted RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 GRIN1Q05586 938 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 BLMP54132 1417 aaPredicted RBP15.61■□□□□ 0.09
PTPN13-203ENST00000427191 WDR64B1ANS9 1081 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 MAEAQ7L5Y9 396 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 TCP11Q8WWU5 503 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 PPP1R13BQ96KQ4 1090 aa15.61■□□□□ 0.09
PTPN13-203ENST00000427191 KIF1BO60333 1816 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ARHGEF10O15013 1369 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 GOLGA8MH3BSY2 632 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 PPP6R2O75170 966 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 MAPK4P31152 587 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 SLC39A6Q13433 755 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 CENPUQ71F23 418 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 DTNBP1Q96EV8 351 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 MLXIPQ9HAP2 919 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ZNF215Q9UL58 517 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 EXOC1LA0A1B0GW35 172 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 VPS41P49754 854 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 IFRD2Q12894 506 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ARL13BQ3SXY8 428 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 FOXP1Q9H334 677 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 FLOT2Q14254 428 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 TAF1BQ53T94 588 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 BLZF1Q9H2G9 400 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 SERTAD1Q9UHV2 236 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 BUB1O43683 1085 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ESRRAP11474 423 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 COPB1P53618 953 aaKnown RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 PIP4K2CQ8TBX8 421 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 EDEM3Q9BZQ6 932 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 NEUROG2Q9H2A3 272 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 RIMBP2O15034 1052 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 SCG2P13521 617 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 GUCY2CP25092 1073 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 DPP8Q6V1X1 898 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-203ENST00000427191 RUBCNQ92622 972 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 FAM26FQ5R3K3 315 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 CDHR1Q96JP9 859 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 STOML1Q9UBI4 398 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 A2MP01023 1474 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 ZNF532Q9HCE3 1301 aa15.6■□□□□ 0.09
PTPN13-203ENST00000427191 KRT37O76014 449 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 NPR1P16066 1061 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 SAT1P21673 171 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 EHHADHQ08426 723 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 MED21Q13503 144 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 METTL23Q86XA0 190 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 ABTB1Q969K4 478 aaPredicted RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
PTPN13-203ENST00000427191 MYO1EQ12965 1108 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 PSMD2Q13200 908 aa15.59■□□□□ 0.09
PTPN13-203ENST00000427191 N4BP2L2Q92802 583 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms