RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 SESTD1Q86VW0 696 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 MIS12Q9H081 205 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 JAK3P52333 1124 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 PRPF38AQ8NAV1 312 aaKnown RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
RPL28-202ENST00000426763 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
RPL28-202ENST00000426763 DPEP1P16444 411 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 NR2F2P24468 414 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PIK3CAP42336 1068 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PDE6CP51160 858 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 MCM6Q14566 821 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 HHIPL2Q6UWX4 724 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 ABI1Q8IZP0 508 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 GIMAP8Q8ND71 665 aaPredicted RBP15.23■□□□□ 0.03
RPL28-202ENST00000426763 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
RPL28-202ENST00000426763 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PLA2G4BP0C869 781 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 CNOT6LQ96LI5 555 aaKnown RBP15.23■□□□□ 0.03
RPL28-202ENST00000426763 APOL6Q9BWW8 343 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 STIM2Q9P246 746 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 PEX26Q7Z412 305 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 P2RX5Q93086 422 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 ENTPD3O75355 529 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 MYL7Q01449 175 aa15.23■□□□□ 0.03
RPL28-202ENST00000426763 ZNF658Q5TYW1 1059 aaPredicted RBP15.23■□□□□ 0.03
RPL28-202ENST00000426763 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
RPL28-202ENST00000426763 ACTN4O43707 911 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 AKR1B1P15121 316 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 COPB2P35606 906 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 RPS6KA1Q15418 735 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
RPL28-202ENST00000426763 PARVGQ9HBI0 331 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 PLCG1P19174 1290 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 ADKP55263 362 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 CBX1P83916 185 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 MTMR1Q13613 665 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 EXOC3L4Q17RC7 722 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 LONRF3Q496Y0 759 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 FASTKD5Q7L8L6 764 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 NLRP7Q8WX94 980 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 ANKRD36BP1Q96IX9 119 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 RRP9O43818 475 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 PSMD2Q13200 908 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 HAUS2Q9NVX0 235 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
RPL28-202ENST00000426763 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 C8orf74Q6P047 294 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 PAIP2Q9BPZ3 127 aaKnown RBP15.22■□□□□ 0.03
RPL28-202ENST00000426763 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
RPL28-202ENST00000426763 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 CEP104O60308 925 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 ARL1P40616 181 aaPredicted RBP15.21■□□□□ 0.03
RPL28-202ENST00000426763 RASA3Q14644 834 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 ZSCAN20P17040 1043 aaPredicted RBP15.21■□□□□ 0.03
RPL28-202ENST00000426763 COPB1P53618 953 aaKnown RBP15.21■□□□□ 0.03
RPL28-202ENST00000426763 Q3C1V9 767 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 MAIP1Q8WWC4 291 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 HACL1Q9UJ83 578 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 FLT1P17948 1338 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 EEF1GP26641 437 aaKnown RBP15.21■□□□□ 0.03
RPL28-202ENST00000426763 CDC25AP30304 524 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.03
RPL28-202ENST00000426763 ALCAMQ13740 583 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 NT5C1BQ96P26 610 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 PARP2Q9UGN5 583 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 FAM184BQ9ULE4 1060 aa15.21■□□□□ 0.03
RPL28-202ENST00000426763 RICTORQ6R327 1708 aa15.21■□□□□ 0.02
RPL28-202ENST00000426763 TUBGCP2Q9BSJ2 902 aa15.21■□□□□ 0.02
RPL28-202ENST00000426763 PRKAG2Q9UGJ0 569 aa15.21■□□□□ 0.02
RPL28-202ENST00000426763 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 BPIFB4P59827 614 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 SBK1Q52WX2 424 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 CFAP58Q5T655 872 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 CHAMP1Q96JM3 812 aa15.2■□□□□ 0.02
RPL28-202ENST00000426763 TBC1D22BQ9NU19 505 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms