RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 CDK7P50613 346 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 FXR1P51114 621 aaKnown RBP eCLIP16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 LY6KQ17RY6 165 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 TDHQ8IZJ6 230 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 IL31RAQ8NI17 732 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 SEZ6LQ9BYH1 1024 aa16.75■□□□□ 0.27
NCKIPSD-205ENST00000426678 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 PIK3CDO00329 1044 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 KIAA0355O15063 1070 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 KPNA6O60684 536 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 PURAQ00577 322 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 FAAP100Q0VG06 881 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 KCNV1Q6PIU1 500 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 USP17L6PQ6QN14 398 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 GPKOWQ92917 476 aaPredicted RBP eCLIP16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 BADQ92934 168 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 MTG1Q9BT17 334 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
NCKIPSD-205ENST00000426678 FRMPD4Q14CM0 1322 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 A6NJR5 290 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 MEIS2O14770 477 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 PSMC6P62333 389 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 ARHGAP1Q07960 439 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 GNPTABQ3T906 1256 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 FBXL16Q8N461 479 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 DDX41Q9UJV9 622 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
NCKIPSD-205ENST00000426678 hCG_1984214I3L0E3 225 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 STAM2O75886 525 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 CDC27P30260 824 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 NAPAP54920 295 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 FUT2Q10981 343 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 PPP1R18Q6NYC8 613 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 ZNF713Q8N859 430 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 AFG1LQ8WV93 481 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 TBX21Q9UL17 535 aa16.72■□□□□ 0.27
NCKIPSD-205ENST00000426678 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 RGS20O76081 388 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 SLC34A2O95436 690 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 MMP3P08254 477 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 LAMC2Q13753 1193 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 DHX37Q8IY37 1157 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 ZFP91Q96JP5 570 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 NID2Q14112 1375 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
NCKIPSD-205ENST00000426678 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 MYH7BA7E2Y1 1941 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 TGFB3P10600 412 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 ITGB8P26012 769 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 DGKDQ16760 1214 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 UBE2SQ16763 222 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 FAM47CQ5HY64 1035 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 PCNX4Q63HM2 1172 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 XRRA1Q6P2D8 792 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 EHMT1Q9H9B1 1298 aa16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 RANBP2P49792 3224 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-205ENST00000426678 FIBPO43427 364 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 GGPS1O95749 300 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 TIMP1P01033 207 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 CD4P01730 458 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 UBA1P22314 1058 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 ADCY7P51828 1080 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 MRPS9P82933 396 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 FPGSQ05932 587 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 PPTC7Q8NI37 304 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 INPP4AQ96PE3 977 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 BARHL2Q9NY43 387 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
NCKIPSD-205ENST00000426678 STXBP3O00186 592 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 SORBS3O60504 671 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 B4GALT4O60513 344 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 ICAM3P32942 547 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 LRIT3Q3SXY7 679 aa16.68■□□□□ 0.26
NCKIPSD-205ENST00000426678 CELF3Q5SZQ8 465 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms