RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CLK2P49760 499 aaKnown RBP12.9□□□□□ -0.35
UBR4-207ENST00000425413 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.35
UBR4-207ENST00000425413 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 EHD4Q9H223 541 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 PRDM4Q9UKN5 801 aa12.9□□□□□ -0.35
UBR4-207ENST00000425413 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 CLCN6P51797 869 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 MAP3K9P80192 1104 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 DMTNQ08495 405 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 CCDC51Q96ER9 411 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 VEZTQ9HBM0 779 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 MRFAP1Q9Y605 127 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
UBR4-207ENST00000425413 DNM2P50570 870 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 UBXN2AP68543 259 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 MIGA2Q7L4E1 593 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 CYP2W1Q8TAV3 490 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 STK17AQ9UEE5 414 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
UBR4-207ENST00000425413 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 ENC1O14682 589 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 NDUFA10O95299 355 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 KRT18P05783 430 aaKnown RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 POTEIP0CG38 1075 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 NCAPH2Q6IBW4 605 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 WDR59Q6PJI9 974 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 IDI2Q9BXS1 227 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 SCN9AQ15858 1988 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 MEIS2O14770 477 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 EPHB6O15197 1021 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 TRIM14Q14142 442 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 PDIA5Q14554 519 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 TMEM179Q6ZVK1 233 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
UBR4-207ENST00000425413 MYH8P13535 1937 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
UBR4-207ENST00000425413 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 STYK1Q6J9G0 422 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.356e-11■■■■■ 61.2
UBR4-207ENST00000425413 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 RXRBP28702 533 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 COASYQ13057 564 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 TRAF5O00463 557 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 MED24O75448 989 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 BMP3P12645 472 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBR4-207ENST00000425413 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 FKBP15Q5T1M5 1219 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 ZNF771Q7L3S4 317 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
UBR4-207ENST00000425413 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
UBR4-207ENST00000425413 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 SPDYE3A6NKU9 549 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 EFCAB8A8MWE9 144 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 PSMC6P62333 389 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
UBR4-207ENST00000425413 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms