RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 VWA3BQ502W6 1294 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 TJAP1Q5JTD0 557 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 ADAM22Q9P0K1 906 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 TRIM35Q9UPQ4 493 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 AK9Q5TCS8 1911 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 CYP27A1Q02318 531 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 MAB21L3Q8N8X9 362 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 GPCPD1Q9NPB8 672 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 ADGRG1Q9Y653 693 aa3.72□□□□□ -1.81
SYNE1-212ENST00000423061 C6orf163Q5TEZ5 329 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 METTL14Q9HCE5 456 aaKnown RBP3.71□□□□□ -1.81
SYNE1-212ENST00000423061 DOLKQ9UPQ8 538 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 VPS36Q86VN1 386 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.71□□□□□ -1.81
SYNE1-212ENST00000423061 PRPF31Q8WWY3 499 aaKnown RBP3.71□□□□□ -1.81
SYNE1-212ENST00000423061 VPS37BQ9H9H4 285 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 ETNK2Q9NVF9 386 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 NKIRAS1Q9NYS0 192 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 SLC4A8Q2Y0W8 1093 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 LZICQ8WZA0 190 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 IQCDQ96DY2 449 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 MMS19Q96T76 1030 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 DCTPP1Q9H773 170 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 TACC3Q9Y6A5 838 aa3.71□□□□□ -1.81
SYNE1-212ENST00000423061 PALM3A6NDB9 673 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 ZBTB7BO15156 539 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MMRN2Q9H8L6 949 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 ZC4H2Q9NQZ6 224 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 RTL1A6NKG5 1358 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 GLT8D2Q9H1C3 349 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 VPS16Q9H269 839 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 METTL5Q9NRN9 209 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 KRT5P13647 590 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 LRRC8BQ6P9F7 803 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 GATAD2AQ86YP4 633 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 CHMP6Q96FZ7 201 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 RAB21Q9UL25 225 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 GOLGA8AA7E2F4 631 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 UBOX5O94941 541 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 IFNLR1Q8IU57 520 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SCYL3Q8IZE3 742 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 KIFC2Q96AC6 838 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 RGS16O15492 202 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 CYP27B1O15528 508 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 ATP1A1P05023 1023 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 FAM153BP0C7A2 387 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 FAM153CQ494X1 144 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 KCNG4Q8TDN1 519 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 FAM192AQ9GZU8 254 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 FAM153AQ9UHL3 310 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 F6X3S4 739 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SPTLC2O15270 562 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 PDIA5Q14554 519 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 KRT72Q14CN4 511 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 PPP2R5BQ15173 497 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MTHFD1LQ6UB35 978 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 EPSTI1Q96J88 318 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SYT15Q9BQS2 421 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MGRN1O60291 552 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 BBOF1Q8ND07 529 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 VIPAS39Q9H9C1 493 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SPHKAPQ2M3C7 1700 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TRAPPC8Q9Y2L5 1435 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 E7ENQ6 273 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MGEA5O60502 916 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 OTUD6AQ7L8S5 288 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MSANTD4Q8NCY6 345 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SRPK1Q96SB4 655 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 OCEL1Q9H607 264 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 ATP7AQ04656 1500 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 RIMS2Q9UQ26 1411 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 PPIDQ08752 370 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 CNPY1Q3B7I2 92 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TSPYL6Q8N831 410 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 NAT14Q8WUY8 206 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 VMP1Q96GC9 406 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 EURLQ9NYK6 297 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 HDAC9Q9UKV0 1011 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 KRT9P35527 623 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 CETN2P41208 172 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 HS2ST1Q7LGA3 356 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 PCDH18Q9HCL0 1135 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 NFE2L3Q9Y4A8 694 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TTC21BQ7Z4L5 1316 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 PRKACBP22694 351 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TRIM67Q6ZTA4 783 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 HSPA8P11142 646 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 LRRC34Q8IZ02 419 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TTC8Q8TAM2 541 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 TELO2Q9Y4R8 837 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 QRICH2Q9H0J4 1663 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 LDHBP07195 334 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 UTS2BQ765I0 119 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MRPL50Q8N5N7 158 aaKnown RBP3.71□□□□□ -1.82
SYNE1-212ENST00000423061 SENP2Q9HC62 589 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 DRD4P21917 467 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 LRP8Q14114 963 aa3.71□□□□□ -1.82
SYNE1-212ENST00000423061 MS4A14Q96JA4 679 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms