RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 EHD4Q9H223 541 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 GPHNQ9NQX3 736 aaPredicted RBP6.78□□□□□ -1.32
HDAC8-212ENST00000421523 HOMER2Q9NSB8 354 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 POLR3EQ9NVU0 708 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 PPP1R9AQ9ULJ8 1098 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 LAMA5O15230 3695 aa6.78□□□□□ -1.32
HDAC8-212ENST00000421523 ZBED9Q6R2W3 1325 aa6.77□□□□□ -1.32
HDAC8-212ENST00000421523 EFCAB14O75071 495 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 CXCL10P02778 98 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 SDHBP21912 280 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 CYP7A1P22680 504 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 NRIP1P48552 1158 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 PLCD1P51178 756 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 RBM10P98175 930 aaKnown RBP6.77□□□□□ -1.33
HDAC8-212ENST00000421523 HNRNPUQ00839 825 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDAC8-212ENST00000421523 ICA1Q05084 483 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 COASYQ13057 564 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 PPM1JQ5JR12 505 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 FAM83BQ5T0W9 1011 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 RBM23Q86U06 439 aaKnown RBP6.77□□□□□ -1.33
HDAC8-212ENST00000421523 ITPRIPQ8IWB1 547 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 UBALD2Q8IYN6 164 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 MIGA1Q8NAN2 632 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 CAGE1Q8TC20 777 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 RHPN1Q8TCX5 695 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 PANK1Q8TE04 598 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 C11orf84Q9BUA3 381 aaPredicted RBP6.77□□□□□ -1.33
HDAC8-212ENST00000421523 VCPKMTQ9H867 229 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 ARHGEF10LQ9HCE6 1279 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 ZBTB40Q9NUA8 1239 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 DACH1Q9UI36 760 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 ADAMTS5Q9UNA0 930 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 SORCS3Q9UPU3 1222 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 EXOC6BQ9Y2D4 811 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
HDAC8-212ENST00000421523 TCRBV5S4A2TA0A5A2 114 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 GLP2RO95838 553 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 ASGR2P07307 311 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 CPT1AP50416 773 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 NFRKBQ6P4R8 1299 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 CERS3Q8IU89 383 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 FTSJ3Q8IY81 847 aaKnown RBP6.76□□□□□ -1.33
HDAC8-212ENST00000421523 EFHBQ8N7U6 833 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
HDAC8-212ENST00000421523 PPP2R3CQ969Q6 453 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 NUP88Q99567 741 aaPredicted RBP6.76□□□□□ -1.33
HDAC8-212ENST00000421523 APOL5Q9BWW9 433 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 LMAN2LQ9H0V9 348 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 SH2D4AQ9H788 454 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 NCDNQ9UBB6 729 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 ANGPTL2Q9UKU9 493 aa6.76□□□□□ -1.33
HDAC8-212ENST00000421523 BAZ2AQ9UIF9 1905 aaKnown RBP6.76□□□□□ -1.33
HDAC8-212ENST00000421523 LGR5O75473 907 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 IDH1O75874 414 aaKnown RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 CKBP12277 381 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 ATF7P17544 494 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 AOC1P19801 751 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 OS9Q13438 667 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 MBTPS1Q14703 1052 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 TAPT1Q6NXT6 567 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 KIAA1211Q6ZU35 1233 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 TMEM179Q6ZVK1 233 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 TTC6Q86TZ1 520 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 AACSQ86V21 672 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 ERC1Q8IUD2 1116 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 SIAH1Q8IUQ4 282 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 RPAP2Q8IXW5 612 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 SPDYE1Q8NFV5 336 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 OR6J1Q8NGC5 347 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 CTAGE1Q96RT6 745 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 SLF1Q9BQI6 1058 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 RTKNQ9BST9 563 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 IFIH1Q9BYX4 1025 aaKnown RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 RAVER2Q9HCJ3 691 aaKnown RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 IL1RAPL2Q9NP60 686 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 TMX2Q9Y320 296 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 CTDP1Q9Y5B0 961 aaPredicted RBP6.75□□□□□ -1.33
HDAC8-212ENST00000421523 MYH7P12883 1935 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 NAV1Q8NEY1 1877 aa6.75□□□□□ -1.33
HDAC8-212ENST00000421523 TENM4Q6N022 2769 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 MYH8P13535 1937 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 IGSF10Q6WRI0 2623 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 MYO10Q9HD67 2058 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 MMP1P03956 469 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 POLR3DP05423 398 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-212ENST00000421523 PDE6AP16499 860 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 BMPR1AP36894 532 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
HDAC8-212ENST00000421523 LMNB2Q03252 620 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 SLFNL1Q499Z3 407 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 HSP90AB4PQ58FF6 505 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 DIEXFQ68CQ4 756 aaKnown RBP6.74□□□□□ -1.33
HDAC8-212ENST00000421523 IQSEC1Q6DN90 963 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 FIBCD1Q8N539 461 aa6.74□□□□□ -1.33
HDAC8-212ENST00000421523 DBF4BQ8NFT6 615 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms