RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 C7orf25Q9BPX7 421 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 SEMA6BQ9H3T3 888 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 CUEDC2Q9H467 287 aa12.21□□□□□ -0.45
DDX56-203ENST00000421223 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 PHLPP2Q6ZVD8 1323 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 BICDL2A1A5D9 508 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 GOLGA6L9A6NEM1 432 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 ENOX2Q16206 610 aaKnown RBP12.21□□□□□ -0.46
DDX56-203ENST00000421223 FBXO11Q86XK2 927 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 OGFOD1Q8N543 542 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 ACER1Q8TDN7 264 aa12.21□□□□□ -0.46
DDX56-203ENST00000421223 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.46
DDX56-203ENST00000421223 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 LGALS16A8MUM7 142 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 CC2D2BQ6DHV5 1058 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 CYP26C1Q6V0L0 522 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 TMTC1Q8IUR5 882 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
DDX56-203ENST00000421223 CYP2W1Q8TAV3 490 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 RAD54LQ92698 747 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 L2HGDHQ9H9P8 463 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 CHMP2AO43633 222 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 BMP3P12645 472 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 HERC4Q5GLZ8 1057 aaPredicted RBP12.2□□□□□ -0.46
DDX56-203ENST00000421223 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 OR8K1Q8NGG5 319 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
DDX56-203ENST00000421223 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 TRAF5O00463 557 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 MYL1P05976 194 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 EEF1GP26641 437 aaKnown RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX56-203ENST00000421223 PPP2R3AQ06190 1150 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 ZNF397Q8NF99 534 aaPredicted RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 PRDM4Q9UKN5 801 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 DNM2P50570 870 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 ARHGAP4P98171 946 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 CYP27A1Q02318 531 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■□□□ 12.6
DDX56-203ENST00000421223 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 SYDE2Q5VT97 1194 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 KIAA1328Q86T90 577 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 GPBP1Q86WP2 473 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 NAA15Q9BXJ9 866 aaKnown RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 EHD4Q9H223 541 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 PANK4Q9NVE7 773 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 PLIN4Q96Q06 1357 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 PSMD14O00487 310 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 ENC1O14682 589 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 ZSCAN20P17040 1043 aaPredicted RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 FAM83BQ5T0W9 1011 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 UNC13DQ70J99 1090 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
DDX56-203ENST00000421223 PKD2L1Q9P0L9 805 aa12.19□□□□□ -0.46
DDX56-203ENST00000421223 PDIA5Q14554 519 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 CCDC40Q4G0X9 1142 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 CDK5RAP2Q96SN8 1893 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 FEZ1Q99689 392 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 MEIS2O14770 477 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 TUBB4AP04350 444 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
DDX56-203ENST00000421223 SMCR8Q8TEV9 937 aaPredicted RBP12.18□□□□□ -0.46
DDX56-203ENST00000421223 NDUFA10O95299 355 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 IPO7O95373 1038 aaKnown RBP12.17□□□□□ -0.46
DDX56-203ENST00000421223 PSMC6P62333 389 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 ITIH6Q6UXX5 1313 aa12.17□□□□□ -0.46
DDX56-203ENST00000421223 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms