RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 SLC5A4Q9NY91 659 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 TSKSQ9UJT2 592 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 CFAP45Q9UL16 551 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 UBIAD1Q9Y5Z9 338 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 ZNF236Q9UL36 1845 aa14.2□□□□□ -0.14
TMEM53-206ENST00000420706 PLXNA1Q9UIW2 1896 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 ASB14A6NK59 587 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 B4DLN1 442 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 GCFC2P16383 781 aaKnown RBP14.19□□□□□ -0.14
TMEM53-206ENST00000420706 CYP2B6P20813 491 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 MCM7P33993 719 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 RGS2P41220 211 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-206ENST00000420706 ORC2Q13416 577 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-206ENST00000420706 PTPAQ15257 358 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 Q4G0T1 1027 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-206ENST00000420706 C4orf32Q8N8J7 132 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 SOCS4Q8WXH5 440 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 MAML3Q96JK9 1138 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 MXRA8Q9BRK3 442 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 GABRQQ9UN88 632 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
TMEM53-206ENST00000420706 DDX49Q9Y6V7 483 aaKnown RBP14.19□□□□□ -0.14
TMEM53-206ENST00000420706 IGLV3-22A0A075B6J6 115 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 MEIS1O00470 390 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 SLC37A4O43826 429 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 NCLP19338 710 aaKnown RBP14.18□□□□□ -0.14
TMEM53-206ENST00000420706 CTCFP49711 727 aaPredicted RBP14.18□□□□□ -0.14
TMEM53-206ENST00000420706 SLC39A14Q15043 492 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 STXBP2Q15833 593 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 CEP55Q53EZ4 464 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 MAMDC4Q6UXC1 1216 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 LINC00301Q8NCQ3 95 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
TMEM53-206ENST00000420706 JADE2Q9NQC1 790 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 DDX25Q9UHL0 483 aaKnown RBP14.18□□□□□ -0.14
TMEM53-206ENST00000420706 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
TMEM53-206ENST00000420706 EIF3JO75822 258 aaKnown RBP14.17□□□□□ -0.14
TMEM53-206ENST00000420706 STAM2O75886 525 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 YEATS4O95619 227 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 BMP15O95972 392 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 GNRH1P01148 92 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 ITGB5P18084 799 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 HOXD10P28358 340 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 FLT3LGP49771 235 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 PDE4DQ08499 809 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 PTGDRQ13258 359 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 STK38Q15208 465 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 PRR16Q569H4 304 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 PLA2G4DQ86XP0 818 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 MSL3Q8N5Y2 521 aaKnown RBP14.17□□□□□ -0.14
TMEM53-206ENST00000420706 LENG9Q96B70 501 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 TINF2Q9BSI4 451 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 TMEM60Q9H2L4 133 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 CEP131Q9UPN4 1083 aa14.17□□□□□ -0.14
TMEM53-206ENST00000420706 RGS20O76081 388 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 SNAI1O95863 264 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 IGHA2P01877 340 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 ARP10275 920 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 XRCC5P13010 732 aaKnown RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 LBX1P52954 281 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 ATP2C1P98194 919 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 PRKCZQ05513 592 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 ARHGEF6Q15052 776 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 OLFML2BQ68BL8 750 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 NLRX1Q86UT6 975 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 LEO1Q8WVC0 666 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 SPATA32Q96LK8 384 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 MTMR9Q96QG7 549 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 APBA2Q99767 749 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 SCAND2PQ9GZW5 306 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 GDPD2Q9HCC8 539 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 FLRT1Q9NZU1 646 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 SRRDQ9UH36 339 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 MRVI1Q9Y6F6 885 aa14.16□□□□□ -0.14
TMEM53-206ENST00000420706 MORC2Q9Y6X9 1032 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-206ENST00000420706 LAD1O00515 517 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 SPTLC2O15270 562 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 MSH4O15457 936 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 MAFGO15525 162 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 FIBPO43427 364 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 NEMFO60524 1076 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 PPP6R2O75170 966 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 MARCKSP29966 332 aaPredicted RBP14.15□□□□□ -0.14
TMEM53-206ENST00000420706 ICAM3P32942 547 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 CALCRLQ16602 461 aa14.15□□□□□ -0.14
TMEM53-206ENST00000420706 CCL14Q16627 93 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms