RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 BTBD19C9JJ37 291 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 CTNND1O60716 968 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 CHGBP05060 677 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 HLA-DOAP06340 250 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 GNA15P30679 374 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 ADD2P35612 726 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 MOGSQ13724 837 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 RRP1BQ14684 758 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 UBE3CQ15386 1083 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 DHX32Q7L7V1 743 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 CTU1Q7Z7A3 348 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 CCDC84Q86UT8 332 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 EXOC6Q8TAG9 804 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 OTUD7AQ8TE49 926 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 ABHD8Q96I13 439 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 IGFLR1Q9H665 355 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 ZCCHC17Q9NP64 241 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 SUPT16HQ9Y5B9 1047 aaKnown RBP8.33□□□□□ -1.08
HMGN1-205ENST00000419378 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 CXCL11O14625 94 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 FKTNO75072 461 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 MBD4O95243 580 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 MX1P20591 662 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 VAMP1P23763 118 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 CAP2P40123 477 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 PLAURQ03405 335 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 ANKRD23Q86SG2 305 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 FOXP4Q8IVH2 680 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 CRACR2BQ8N4Y2 399 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
HMGN1-205ENST00000419378 EHD4Q9H223 541 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 ARMT1Q9H993 441 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 LATS2Q9NRM7 1088 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 SERPINB13Q9UIV8 391 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 AFG3L2Q9Y4W6 797 aa8.32□□□□□ -1.08
HMGN1-205ENST00000419378 SALL3Q9BXA9 1300 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 LOC285556D6RIA3 1793 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 PDHXO00330 501 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 GLRX3O76003 335 aaKnown RBP8.31□□□□□ -1.08
HMGN1-205ENST00000419378 SOX18P35713 384 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 JAG1P78504 1218 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 TBC1D8BQ0IIM8 1120 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 HYAL2Q12891 473 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 SHROOM1Q2M3G4 852 aaPredicted RBP8.31□□□□□ -1.08
HMGN1-205ENST00000419378 ANKRD45Q5TZF3 282 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
HMGN1-205ENST00000419378 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 SALL4Q9UJQ4 1053 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
HMGN1-205ENST00000419378 ADGRA2Q96PE1 1338 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 ERC2O15083 957 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 PRKAB2O43741 272 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 SORBS3O60504 671 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 TLR2O60603 784 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 GDF11O95390 407 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 ASNSP08243 561 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 EDN3P14138 238 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 PLCD1P51178 756 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 NRLP54845 237 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 SP3Q02447 781 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 SPP2Q13103 211 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 GPAT2Q6NUI2 795 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 GADL1Q6ZQY3 521 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 FASTKD5Q7L8L6 764 aaKnown RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 SMC5Q8IY18 1101 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 CD99L2Q8TCZ2 262 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 ERO1AQ96HE7 468 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 PARK7Q99497 189 aaKnown RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 PUS7LQ9H0K6 701 aaKnown RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 AS3MTQ9HBK9 375 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 DCP1AQ9NPI6 582 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-205ENST00000419378 MCM9Q9NXL9 1143 aa8.3□□□□□ -1.08
HMGN1-205ENST00000419378 BAZ2AQ9UIF9 1905 aaKnown RBP8.29□□□□□ -1.08
HMGN1-205ENST00000419378 ZBTB42B2RXF5 422 aa8.29□□□□□ -1.08
HMGN1-205ENST00000419378 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms