RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NPHP3-ACAD11A0A0J9YXS1 232 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZC3H12DA2A288 527 aaKnown RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 BUB1BO60566 1050 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 TCF3P15923 654 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 PAMP19021 973 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 CORO7P57737 925 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 GRB10Q13322 594 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 NCAPHQ15003 741 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 VMACQ2NL98 169 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 IGDCC3Q8IVU1 814 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 CRACR2BQ8N4Y2 399 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 LZTR1Q8N653 840 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 RCC1LQ96I51 464 aaKnown RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 RRP7BPQ9NSQ0 103 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 GULP1Q9UBP9 304 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 FANCAO15360 1455 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZNF644Q9H582 1327 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 INO80Q9ULG1 1556 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 ADGRL1O94910 1474 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 PFKLP17858 780 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 LIMS1P48059 325 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 RBM25P49756 843 aaKnown RBP5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 PRR5P85299 388 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 TARBP2Q15633 366 aaKnown RBP5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 BVESQ8NE79 360 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 PWWP2AQ96N64 755 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 LGR4Q9BXB1 951 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 GPRC5CQ9NQ84 441 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 ACTR10Q9NZ32 417 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 CLEC1BQ9P126 229 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 PCDHA5Q9Y5H7 936 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZFYVE16Q7Z3T8 1539 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 UNC13BO14795 1591 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 DIP2BQ9P265 1576 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 TSPOAP1O95153 1857 aa5.41□□□□□ -1.54
HMGB3P20-201ENST00000417997 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 MBD5Q9P267 1494 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 ATP7AQ04656 1500 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 B2RBV5 119 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 IRS4O14654 1257 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 SRGAP3O43295 1099 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 DDAH1O94760 285 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 TSPY4P0CV99 314 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 TSPY10P0CW01 314 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 PLS3P13797 630 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 SCRN1Q12765 414 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 SV2CQ496J9 727 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 TNNI3KQ59H18 835 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 EFCAB2Q5VUJ9 269 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 LILRA6Q6PI73 481 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 C6orf15Q6UXA7 325 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 TTLL10Q6ZVT0 673 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 FAM129CQ86XR2 697 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 TMEFF1Q8IYR6 380 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 DACT3Q96B18 629 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 BCAS3Q9H6U6 928 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 EPB41L4AQ9HCS5 686 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 BTG4Q9NY30 223 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 FAN1Q9Y2M0 1017 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 EMC9Q9Y3B6 208 aa5.4□□□□□ -1.54
HMGB3P20-201ENST00000417997 GLI2P10070 1586 aa5.4□□□□□ -1.55
HMGB3P20-201ENST00000417997 HECW2Q9P2P5 1572 aa5.4□□□□□ -1.55
HMGB3P20-201ENST00000417997 EIF2AK4Q9P2K8 1649 aaKnown RBP5.4□□□□□ -1.55
HMGB3P20-201ENST00000417997 KIF15Q9NS87 1388 aa5.4□□□□□ -1.55
HMGB3P20-201ENST00000417997 KDM5DQ9BY66 1539 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 DUOX2Q9NRD8 1548 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 TRBV23OR9-2A0A075B6M9 112 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 NPHS1O60500 1241 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 GTF2IRD2BQ6EKJ0 949 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 GTF2IRD2Q86UP8 949 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 FAM178BQ8IXR5 827 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZNF513Q8N8E2 541 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 NLGN2Q8NFZ4 835 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 ALG3Q92685 438 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 KIF13AQ9H1H9 1805 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 NCOA1Q15788 1441 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 ANKRD50Q9ULJ7 1429 aa5.39□□□□□ -1.55
HMGB3P20-201ENST00000417997 ARHGEF12Q9NZN5 1544 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 IQGAP3Q86VI3 1631 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 RICTORQ6R327 1708 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 TRIM13O60858 407 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 FUCA1P04066 466 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 GLI4P10075 376 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 HOXA5P20719 270 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 ETFBP38117 255 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 ZNF143P52747 638 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 CTSWP56202 376 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 ARID5AQ03989 594 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 CYB5RLQ6IPT4 315 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 FBLN5Q9UBX5 448 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 PRKAG3Q9UGI9 489 aa5.38□□□□□ -1.55
HMGB3P20-201ENST00000417997 NUDT5Q9UKK9 219 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms