RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 LCTP09848 1927 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 SMCO2A6NFE2 343 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 hCG_1984214I3L0E3 225 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 GH1P01241 217 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 SCG2P13521 617 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 NEK4P51957 841 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 GHRHRQ02643 423 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 PFKFB3Q16875 520 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 PPP1R18Q6NYC8 613 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 ZNF713Q8N859 430 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 IL31RAQ8NI17 732 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 Q9Y3F1 56 aa12.69□□□□□ -0.38
TM9SF4-203ENST00000417389 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 STXBP3O00186 592 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 MEIS2O14770 477 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 CABYRO75952 493 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 ARIH2O95376 493 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 FUT2Q10981 343 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 KCNV1Q6PIU1 500 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 PCDHA6Q9UN73 950 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 PCDHA8Q9Y5H6 950 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 LRRC37A2A6NM11 1700 aa12.68□□□□□ -0.38
TM9SF4-203ENST00000417389 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 CDKL5O76039 1030 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 IFNAR1P17181 557 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 AK2P54819 239 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 TLE2Q04725 743 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 FAM47CQ5HY64 1035 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
TM9SF4-203ENST00000417389 ELP1O95163 1332 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 CTAGE5O15320 804 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 STAM2O75886 525 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 GGPS1O95749 300 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 GNA11P29992 359 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 ZNF76P36508 570 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 EVCP57679 992 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 NLRP5P59047 1200 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 PSMC6P62333 389 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 SP4Q02446 784 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 CCDC148Q8NFR7 591 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 TPCN1Q9ULQ1 816 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 NID2Q14112 1375 aa12.66□□□□□ -0.38
TM9SF4-203ENST00000417389 MROH7Q68CQ1 1323 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 ARVCFO00192 962 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 FIBPO43427 364 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 KPNA6O60684 536 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 FOSP01100 380 aaPredicted RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 CLTBP09497 229 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 NTRK3Q16288 839 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 REXO1Q8N1G1 1221 aaKnown RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 SPATA33Q96N06 139 aa12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 MTG1Q9BT17 334 aaPredicted RBP12.65□□□□□ -0.38
TM9SF4-203ENST00000417389 A6NJR5 290 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 RGS20O76081 388 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 DEXIO95424 95 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 MMP3P08254 477 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms