RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ADAMTS17Q8TE56 1095 aa4.13□□□□□ -1.75
LINC00428-201ENST00000415620 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
LINC00428-201ENST00000415620 SPATA6Q9NWH7 488 aaPredicted RBP4.13□□□□□ -1.75
LINC00428-201ENST00000415620 SUCOQ9UBS9 1254 aaKnown RBP4.13□□□□□ -1.75
LINC00428-201ENST00000415620 ST6GALNAC2Q9UJ37 374 aa4.13□□□□□ -1.75
LINC00428-201ENST00000415620 TSC22D4Q9Y3Q8 395 aa4.13□□□□□ -1.75
LINC00428-201ENST00000415620 ZNF536O15090 1300 aa4.13□□□□□ -1.75
LINC00428-201ENST00000415620 C9IYK1 514 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 H0Y8X5 98 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 SUPT5HO00267 1087 aaKnown RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 GLI4P10075 376 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 LRRFIP1Q32MZ4 808 aaKnown RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 ANKRD39Q53RE8 183 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 INTS3Q68E01 1043 aaKnown RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 BORAQ6PGQ7 559 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 FAM124AQ86V42 546 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 RGS22Q8NE09 1264 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 ZNF296Q8WUU4 475 aaPredicted RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 TSPAN17Q96FV3 270 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 CDK5RAP1Q96SZ6 601 aaKnown RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 VPS11Q9H270 941 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 CHD4Q14839 1912 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 CLTCQ00610 1675 aaKnown RBP4.12□□□□□ -1.75
LINC00428-201ENST00000415620 ITSN2Q9NZM3 1697 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 FAM135BQ49AJ0 1406 aa4.12□□□□□ -1.75
LINC00428-201ENST00000415620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC00428-201ENST00000415620 NWD1Q149M9 1564 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 DIP2CQ9Y2E4 1556 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 ABCA6Q8N139 1617 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 PATL2C9JE40 543 aaKnown RBP4.11□□□□□ -1.75
LINC00428-201ENST00000415620 ACRP10323 421 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 RGL3Q3MIN7 710 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 CWF19L1Q69YN2 538 aaKnown RBP4.11□□□□□ -1.75
LINC00428-201ENST00000415620 SND1Q7KZF4 910 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC00428-201ENST00000415620 SLITRK4Q8IW52 837 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 SMARCC2Q8TAQ2 1214 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 CPA5Q8WXQ8 436 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 ZBTB8AQ96BR9 441 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 NOX5Q96PH1 765 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 ZNF747Q9BV97 191 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 DSCC1Q9BVC3 393 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 PCED1AQ9H1Q7 454 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 INVSQ9Y283 1065 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 JCADQ9P266 1359 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 NPATQ14207 1427 aa4.11□□□□□ -1.75
LINC00428-201ENST00000415620 ZC3H13Q5T200 1668 aaKnown RBP4.1□□□□□ -1.75
LINC00428-201ENST00000415620 TACR1P25103 407 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 PMLP29590 882 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 NOP2P46087 812 aaKnown RBP4.1□□□□□ -1.75
LINC00428-201ENST00000415620 MEX3CQ5U5Q3 659 aaKnown RBP4.1□□□□□ -1.75
LINC00428-201ENST00000415620 GK5Q6ZS86 529 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 CABP7Q86V35 215 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 PTCHD1Q96NR3 888 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 FCRL3Q96P31 734 aaPredicted RBP4.1□□□□□ -1.75
LINC00428-201ENST00000415620 TRAIPQ9BWF2 469 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 SSBP3Q9BWW4 388 aaPredicted RBP4.1□□□□□ -1.75
LINC00428-201ENST00000415620 UBP1Q9NZI7 540 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 VTI1BQ9UEU0 232 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 ADAMTS1Q9UHI8 967 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 AGLP35573 1532 aa4.1□□□□□ -1.75
LINC00428-201ENST00000415620 MROH6A6NGR9 719 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 TBC1D8O95759 1140 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 AMHP03971 560 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 ZNF165P49910 485 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 PRELPP51888 382 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 PMS1P54277 932 aaKnown RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 ZNF445P59923 1031 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 TAGLNQ01995 201 aaKnown RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 CACNB2Q08289 660 aaPredicted RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 TRIM26Q12899 539 aaPredicted RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 SLC9A5Q14940 896 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 SURF1Q15526 300 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 SEZ6Q53EL9 994 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 LIMS2Q7Z4I7 341 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 PPFIBP1Q86W92 1011 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 TAB3Q8N5C8 712 aaPredicted RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 LINC00482Q8N8I6 264 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 SMARCC1Q92922 1105 aaPredicted RBP4.09□□□□□ -1.75
LINC00428-201ENST00000415620 DHRS1Q96LJ7 313 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 NUDT5Q9UKK9 219 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 FHOD1Q9Y613 1164 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 HS3ST3A1Q9Y663 406 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 REREQ9P2R6 1566 aa4.09□□□□□ -1.75
LINC00428-201ENST00000415620 DEPDC5O75140 1603 aa4.09□□□□□ -1.76
LINC00428-201ENST00000415620 L1CAMP32004 1257 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 AFF2P51816 1311 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 SMAD4Q13485 552 aaKnown RBP4.08□□□□□ -1.76
LINC00428-201ENST00000415620 CDSNQ15517 529 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 FAM26FQ5R3K3 315 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 DEFB132Q7Z7B7 95 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 CCDC144CPQ8IYA2 1237 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 NETO2Q8NC67 525 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 PEX11GQ96HA9 241 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 NT5C1AQ9BXI3 368 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 KLC2Q9H0B6 622 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 BCAS3Q9H6U6 928 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 PCDH18Q9HCL0 1135 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 GP6Q9HCN6 339 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 MRS2Q9HD23 443 aa4.08□□□□□ -1.76
LINC00428-201ENST00000415620 UGGT2Q9NYU1 1516 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms