RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 MTA3Q9BTC8 594 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 AAASQ9NRG9 546 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 SAGE1Q9NXZ1 904 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 SNX14Q9Y5W7 946 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 MYH6P13533 1939 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 IGF2BP3O00425 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 TRIM66O15016 1216 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 FLOT1O75955 427 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 TBC1D8O95759 1140 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 BMP3P12645 472 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 VCAM1P19320 739 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 HOXA7P31268 230 aaPredicted RBP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 MAGEA9P43362 315 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 NUCB2P80303 420 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 COG2Q14746 738 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 KIF22Q14807 665 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 HSP90B2PQ58FF3 399 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 TREML2Q5T2D2 321 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 AP1ARQ63HQ0 302 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 CYB5R4Q7L1T6 521 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 SIAH1Q8IUQ4 282 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 PNMA1Q8ND90 353 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 ZNF397Q8NF99 534 aaPredicted RBP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
LINC01888-201ENST00000415138 PTPN18Q99952 460 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
LINC01888-201ENST00000415138 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GOLGA6CA6NDK9 693 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GOLGA6BA6NDN3 693 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 NDUFB10O96000 172 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GOLGA6DP0CG33 693 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
LINC01888-201ENST00000415138 ADCY2Q08462 1091 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 DGKZQ13574 1117 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 RCSD1Q6JBY9 416 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 MB21D2Q8IYB1 491 aaPredicted RBP10.84□□□□□ -0.67
LINC01888-201ENST00000415138 ENAHQ8N8S7 591 aaPredicted RBP10.84□□□□□ -0.67
LINC01888-201ENST00000415138 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
LINC01888-201ENST00000415138 DCAF4Q8WV16 495 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 ANKS1AQ92625 1134 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 KCNB2Q92953 911 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 TBC1D32Q96NH3 1257 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 ASCC2Q9H1I8 757 aaPredicted RBP10.84□□□□□ -0.67
LINC01888-201ENST00000415138 GOLGA6AQ9NYA3 693 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
LINC01888-201ENST00000415138 TMEM232C9JQI7 657 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 ZBED4O75132 1171 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 TPM1P09493 284 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CALM1P0DP23 149 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CALM2P0DP24 149 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CALM3P0DP25 149 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CYP2C8P10632 490 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 ABCD1P33897 745 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CTCFP49711 727 aaPredicted RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 STAT2P52630 851 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CRHR2Q13324 411 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 ADCK5Q3MIX3 580 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 RUFY3Q7L099 469 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 SRLQ86TD4 932 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CTCFLQ8NI51 663 aaPredicted RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 NUP133Q8WUM0 1156 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 DRC1Q96MC2 740 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 TM6SF1Q9BZW5 370 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 TAF6LQ9Y6J9 622 aa10.83□□□□□ -0.68
LINC01888-201ENST00000415138 COL11A1P12107 1806 aaPredicted RBP10.83□□□□□ -0.68
LINC01888-201ENST00000415138 CEP350Q5VT06 3117 aa10.82□□□□□ -0.68
LINC01888-201ENST00000415138 PARP14Q460N5 1801 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms