RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SLC30A3Q99726 388 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
VPS41-205ENST00000414632 MRIQ9BWK5 157 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 PIF1Q9H611 641 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 EFCC1Q9HA90 598 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 ZFYVE1Q9HBF4 777 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 PAG1Q9NWQ8 432 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 RFX7Q2KHR2 1363 aa5.89□□□□□ -1.47
VPS41-205ENST00000414632 ZSWIM8A7E2V4 1837 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 GPR75-ASB3A0A0A6YYF3 556 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 TLDC2A0PJX2 215 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 METTL12A8MUP2 240 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 FOXN1O15353 648 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 DGAT1O75907 488 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 SSBP05455 408 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS41-205ENST00000414632 LDHCP07864 332 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 PDE6AP16499 860 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 ATP5JP18859 108 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 GRIA4P48058 902 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 IREB2P48200 963 aaKnown RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 NASPP49321 788 aaPredicted RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 PTSQ03393 145 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 MAP3K12Q12852 859 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 FBXL19Q6PCT2 694 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 FAM83AQ86UY5 434 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 TGFBRAP1Q8WUH2 860 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 FAM151AQ8WW52 585 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 ZKSCAN4Q969J2 545 aaPredicted RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 NSUN5Q96P11 429 aaKnown RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 HHIPQ96QV1 700 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 ECHDC1Q9NTX5 307 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 GINM1Q9NU53 330 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 NDFIP2Q9NV92 336 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 SAP30BPQ9UHR5 308 aaKnown RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 TLR6Q9Y2C9 796 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 EFR3BQ9Y2G0 817 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 TMA7Q9Y2S6 64 aaKnown RBP5.88□□□□□ -1.47
VPS41-205ENST00000414632 ZNF532Q9HCE3 1301 aa5.88□□□□□ -1.47
VPS41-205ENST00000414632 SLC35F4A4IF30 521 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 SOBPA7XYQ1 873 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 BAG3O95817 575 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 CELA3AP09093 270 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 HOXD8P13378 290 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 CD33P20138 364 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 LIG3P49916 1009 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 FKBP1BP68106 108 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 NFX1Q12986 1120 aaKnown RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 NOGQ13253 232 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 HDAC1Q13547 482 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 VGLL4Q14135 290 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 PKDCCQ504Y2 493 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 SLC9C2Q5TAH2 1124 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 FKBP1CQ5VVH2 108 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 DHX32Q7L7V1 743 aaKnown RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 RAB44Q7Z6P3 723 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 CCDC84Q86UT8 332 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 CKAP2LQ8IYA6 745 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 TRIM22Q8IYM9 498 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS41-205ENST00000414632 NXPE3Q969Y0 559 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 OPTNQ96CV9 577 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 ABHD17AQ96GS6 310 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 GPATCH3Q96I76 525 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 SPACA7Q96KW9 195 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 WRNIP1Q96S55 665 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 HAUS7Q99871 368 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 NT5C1AQ9BXI3 368 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 IDI2Q9BXS1 227 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 OSBPL5Q9H0X9 879 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 RWDD1Q9H446 243 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 ARMT1Q9H993 441 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 FLT1P17948 1338 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 ATRNL1Q5VV63 1379 aa5.87□□□□□ -1.47
VPS41-205ENST00000414632 RPAP1Q9BWH6 1393 aaPredicted RBP5.87□□□□□ -1.47
VPS41-205ENST00000414632 A0A096LPE4 126 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 A0A1W2PPZ6 126 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 TCRBV5S4A2TA0A5A2 114 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 PRKAB2O43741 272 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 GREM1O60565 184 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 ENTPD3O75355 529 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 MBD4O95243 580 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 PF4P02776 101 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 MX1P20591 662 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 ITPKAP23677 461 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 ADD2P35612 726 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 MAP2K2P36507 400 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 LBX1P52954 281 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 NRLP54845 237 aa5.86□□□□□ -1.47
VPS41-205ENST00000414632 MAP2K1Q02750 393 aaPredicted RBP5.86□□□□□ -1.47
VPS41-205ENST00000414632 BMS1Q14692 1282 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms