RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 ESR2Q92731 530 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 IWS1Q96ST2 819 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 RNF41Q9H4P4 317 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 GTF2IRD1Q9UHL9 959 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 DDX41Q9UJV9 622 aaKnown RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 PARNO95453 639 aaKnown RBP14.24□□□□□ -0.13
LIMS2-210ENST00000413578 F2P00734 622 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 CKBP12277 381 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 HOXD8P13378 290 aaPredicted RBP14.24□□□□□ -0.13
LIMS2-210ENST00000413578 KCNJ6P48051 423 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 GHRHRQ02643 423 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
LIMS2-210ENST00000413578 CNKSR3Q6P9H4 555 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 SEPT14Q6ZU15 432 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 TMCO2Q7Z6W1 182 aaPredicted RBP14.24□□□□□ -0.13
LIMS2-210ENST00000413578 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 HLA-CQ95604 372 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
LIMS2-210ENST00000413578 BRWD1Q9NSI6 2320 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 OPLAHO14841 1288 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 GJB5O95377 273 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 CASTP20810 708 aaKnown RBP14.23□□□□□ -0.13
LIMS2-210ENST00000413578 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 STXBP2Q15833 593 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 DGKDQ16760 1214 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 QRICH1Q2TAL8 776 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 WNT8BQ93098 351 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 HDAC6Q9UBN7 1215 aa14.23□□□□□ -0.13
LIMS2-210ENST00000413578 ARIH1Q9Y4X5 557 aaPredicted RBP14.23□□□□□ -0.13
LIMS2-210ENST00000413578 TCF20Q9UGU0 1960 aaKnown RBP14.22□□□□□ -0.13
LIMS2-210ENST00000413578 PTPRSQ13332 1948 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 ABHD14A-ACY1A0A1B0GW23 586 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 KDM4AO75164 1064 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 RGS20O76081 388 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 PSEN2P49810 448 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 RRP1P56182 461 aaKnown RBP14.22□□□□□ -0.13
LIMS2-210ENST00000413578 ERVK-21P61565 698 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 PTK7Q13308 1070 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 ASPRV1Q53RT3 343 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 CCDC178Q5BJE1 867 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 MCF2L2Q86YR7 1114 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
LIMS2-210ENST00000413578 PPTC7Q8NI37 304 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS2-210ENST00000413578 RAD9AQ99638 391 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 LRFN3Q9BTN0 628 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 JMJD4Q9H9V9 463 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 SUGCTQ9HAC7 445 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
LIMS2-210ENST00000413578 LINC01553A4QN01 128 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 EIF3JO75822 258 aaKnown RBP14.21□□□□□ -0.13
LIMS2-210ENST00000413578 NR3C2P08235 984 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 SDSP20132 328 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 HSD17B4P51659 736 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 HIC1Q14526 733 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 CHST3Q7LGC8 479 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 FAM122AQ96E09 287 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 TGS1Q96RS0 853 aaKnown RBP14.21□□□□□ -0.13
LIMS2-210ENST00000413578 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
LIMS2-210ENST00000413578 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
LIMS2-210ENST00000413578 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
LIMS2-210ENST00000413578 MRPL11Q9Y3B7 192 aaKnown RBP14.21□□□□□ -0.13
LIMS2-210ENST00000413578 COL4A4P53420 1690 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-210ENST00000413578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-210ENST00000413578 ZNF213O14771 459 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 EFCAB14O75071 495 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 ZNF286BP0CG31 522 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 EIF2AK2P19525 551 aaKnown RBP14.2□□□□□ -0.14
LIMS2-210ENST00000413578 HOXC8P31273 242 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-210ENST00000413578 ZNF200P98182 395 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-210ENST00000413578 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 MFSD10Q14728 455 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 ZNF618Q5T7W0 954 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 IQCA1Q86XH1 822 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 FBXO11Q86XK2 927 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 MTMR8Q96EF0 704 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 KATNAL1Q9BW62 490 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 CD320Q9NPF0 282 aa14.2□□□□□ -0.14
LIMS2-210ENST00000413578 TRIM6-TRIM34B2RNG4 842 aa14.19□□□□□ -0.14
LIMS2-210ENST00000413578 GPR37L1O60883 481 aa14.19□□□□□ -0.14
LIMS2-210ENST00000413578 PPP1R11O60927 126 aaPredicted RBP14.19□□□□□ -0.14
LIMS2-210ENST00000413578 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
LIMS2-210ENST00000413578 MYSM1Q5VVJ2 828 aa14.19□□□□□ -0.14
LIMS2-210ENST00000413578 STOX1Q6ZVD7 989 aa14.19□□□□□ -0.14
LIMS2-210ENST00000413578 SMC5Q8IY18 1101 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms