RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 DNAJA1P31689 397 aaKnown RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 GRIA2P42262 883 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 KCNJ6P48051 423 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 RPL11P62913 178 aaKnown RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 ARID5AQ03989 594 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 SKOR2Q2VWA4 1001 aaPredicted RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 NT5DC1Q5TFE4 455 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 E4F1Q66K89 784 aaPredicted RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 IQCEQ6IPM2 695 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 DBX2Q6ZNG2 339 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 CEP68Q76N32 757 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 FRMD5Q7Z6J6 570 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 STK32CQ86UX6 486 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 NLRP10Q86W26 655 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 DCP2Q8IU60 420 aaKnown RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 CARFQ8N187 725 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 RCBTB1Q8NDN9 531 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 DIO2Q92813 273 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 TEPSINQ96N21 525 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 GORASP1Q9BQQ3 440 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 AP5M1Q9H0R1 490 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 ST7Q9NRC1 585 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 PALD1Q9ULE6 856 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 PCDHA2Q9Y5H9 948 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 TIMM13Q9Y5L4 95 aaPredicted RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 SCG5P05408 212 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 CELA3BP08861 270 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 CYP2C8P10632 490 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 STAT5AP42229 794 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 GFRA1P56159 465 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 KCNAB2Q13303 367 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 SLC10A6Q3KNW5 377 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 CD300LDQ6UXZ3 194 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 ETV3LQ6ZN32 361 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 MILR1Q7Z6M3 343 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 FERMT3Q86UX7 667 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 PPIL6Q8IXY8 311 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 CELF2-AS1Q8N7Q2 184 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 TMEM145Q8NBT3 493 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 HNRNPLLQ8WVV9 542 aaKnown RBP3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 DDX1Q92499 740 aaKnown RBP3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 SEC14L1Q92503 715 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 TRMT2BQ96GJ1 504 aaKnown RBP3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 TMEM169Q96HH4 297 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 DUSP10Q9Y6W6 482 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 X6R8D5 127 aa3.3□□□□□ -1.88
RNU2-54P-201ENST00000410299 MYO1BO43795 1136 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 NOBOXO60393 691 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 CPP00450 1065 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 CAPNS1P04632 268 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 LTBRP36941 435 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 SLC6A11P48066 632 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 SARSP49591 514 aaKnown RBP3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 RBM25P49756 843 aaKnown RBP3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 RTP5Q14D33 572 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 UBXN11Q5T124 520 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 SLC35F1Q5T1Q4 408 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 MROH9Q5TGP6 573 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 EEPD1Q7L9B9 569 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 MIB1Q86YT6 1006 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 RIOX2Q8IUF8 465 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 Q8N1Y9 231 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 LINC00482Q8N8I6 264 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 C1orf159Q96HA4 380 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 CHAMP1Q96JM3 812 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 CCDC140Q96MF4 163 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 C11orf84Q9BUA3 381 aaPredicted RBP3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 BDH2Q9BUT1 245 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 USP40Q9NVE5 1235 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 NTMQ9P121 344 aa3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 R3HCC1Q9Y3T6 440 aaKnown RBP3.29□□□□□ -1.88
RNU2-54P-201ENST00000410299 A0A1W2PQU0 124 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 SMARCA5O60264 1052 aaPredicted RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 THBS2P35442 1172 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 GTF2A2P52657 109 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 KRTAP10-2P60368 255 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 PPP2R2AP63151 447 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 RBM10P98175 930 aaKnown RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 PLP2Q04941 152 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 LSAMPQ13449 338 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 TESK1Q15569 626 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 ACBD5Q5T8D3 534 aaPredicted RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 ERICH6BQ5W0A0 696 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 TTLL7Q6ZT98 887 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 ANKS3Q6ZW76 656 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 PRRT2Q7Z6L0 340 aaPredicted RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 ZNF761Q86XN6 746 aaPredicted RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 KYQ8NBH2 561 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 ARRDC4Q8NCT1 418 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 IER2Q9BTL4 223 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 LNPKQ9C0E8 428 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 EPN3Q9H201 632 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 CLDND1Q9NY35 253 aa3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 COA3Q9Y2R0 106 aaPredicted RBP3.28□□□□□ -1.88
RNU2-54P-201ENST00000410299 TCRBV5S2A0A599 114 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 AGRPO00253 132 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 HGSO14964 777 aaPredicted RBP3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 KLF4O43474 513 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 DLX3O60479 287 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 MSCO60682 206 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms