RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 TPCN1Q9ULQ1 816 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 NKRFO15226 690 aaKnown RBP eCLIP35.82■■■■□ 3.32
TRAF3IP1-203ENST00000409739 TXNP10599 105 aaKnown RBP35.82■■■■□ 3.32
TRAF3IP1-203ENST00000409739 FSCN1Q16658 493 aaKnown RBP35.82■■■■□ 3.32
TRAF3IP1-203ENST00000409739 CCDC62Q6P9F0 684 aa35.82■■■■□ 3.32
TRAF3IP1-203ENST00000409739 C7orf61Q8IZ16 206 aa35.82■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SNX17Q15036 470 aa35.81■■■■□ 3.32
TRAF3IP1-203ENST00000409739 ANKRD1Q15327 319 aa35.81■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SLC39A5Q6ZMH5 540 aa35.81■■■■□ 3.32
TRAF3IP1-203ENST00000409739 COPS5Q92905 334 aa35.81■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SLC26A6Q9BXS9 759 aa35.81■■■■□ 3.32
TRAF3IP1-203ENST00000409739 RGS20O76081 388 aa35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 ASGR1P07306 291 aa35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 NEK4P51957 841 aa35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 AKAP17AQ02040 695 aaKnown RBP35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 RIC8AQ9NPQ8 531 aa35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 NR2E3Q9Y5X4 410 aa35.8■■■■□ 3.32
TRAF3IP1-203ENST00000409739 H0YGN5 161 aa35.79■■■■□ 3.32
TRAF3IP1-203ENST00000409739 ADCY7P51828 1080 aa35.79■■■■□ 3.32
TRAF3IP1-203ENST00000409739 OR6J1Q8NGC5 347 aa35.79■■■■□ 3.32
TRAF3IP1-203ENST00000409739 ZFP91Q96JP5 570 aaPredicted RBP35.79■■■■□ 3.32
TRAF3IP1-203ENST00000409739 CPLX1O14810 134 aa35.78■■■■□ 3.32
TRAF3IP1-203ENST00000409739 RTP1P59025 263 aa35.78■■■■□ 3.32
TRAF3IP1-203ENST00000409739 MRPS9P82933 396 aaKnown RBP35.78■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SCRN1Q12765 414 aa35.78■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SMCO2A6NFE2 343 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 LY6KQ17RY6 165 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 TEX2Q8IWB9 1127 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 C22orf23Q9BZE7 217 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SLKQ9H2G2 1235 aaPredicted RBP35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 STARD7Q9NQZ5 370 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 MRVI1Q9Y6F6 885 aa35.77■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SCN10AQ9Y5Y9 1956 aa35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 PFKFB2O60825 505 aa35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 C1orf53Q5VUE5 145 aa35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 PCNX4Q63HM2 1172 aa35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 KIF2CQ99661 725 aa35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 DDX41Q9UJV9 622 aaKnown RBP35.76■■■■□ 3.32
TRAF3IP1-203ENST00000409739 SPDYE3A6NKU9 549 aa35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 SSRP1Q08945 709 aaKnown RBP35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 TRIM22Q8IYM9 498 aa35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 GLT1D1Q96MS3 346 aa35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 PCDHA6Q9UN73 950 aa35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 PCDHA8Q9Y5H6 950 aa35.75■■■■□ 3.31
TRAF3IP1-203ENST00000409739 LTBP2Q14767 1821 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ESYT2A0FGR8 921 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ZEB2O60315 1214 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 STAM2O75886 525 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 RBM25P49756 843 aaKnown RBP35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CPT1AP50416 773 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 TRIM60Q495X7 471 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CPLX2Q6PUV4 134 aaKnown RBP35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 GLT8D2Q9H1C3 349 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ATP11BQ9Y2G3 1177 aa35.74■■■■□ 3.31
TRAF3IP1-203ENST00000409739 LARGE1O95461 756 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 GH1P01241 217 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ARHGAP1Q07960 439 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CXCL17Q6UXB2 119 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CCDC12Q8WUD4 166 aaPredicted RBP35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 INPP4AQ96PE3 977 aaPredicted RBP35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ZMYND12Q9H0C1 365 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ELP1O95163 1332 aa35.73■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CLK2P49760 499 aaKnown RBP35.72■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ME3Q16798 604 aa35.72■■■■□ 3.31
TRAF3IP1-203ENST00000409739 XRRA1Q6P2D8 792 aa35.72■■■■□ 3.31
TRAF3IP1-203ENST00000409739 KCNV1Q6PIU1 500 aa35.72■■■■□ 3.31
TRAF3IP1-203ENST00000409739 GNPTABQ3T906 1256 aa35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 PGBD1Q96JS3 809 aa35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 EHMT1Q9H9B1 1298 aa35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 TMEM260Q9NX78 707 aa35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 RTEL1Q9NZ71 1219 aa35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ZMYND8Q9ULU4 1186 aaPredicted RBP35.71■■■■□ 3.31
TRAF3IP1-203ENST00000409739 A6NJR5 290 aa35.7■■■■□ 3.31
TRAF3IP1-203ENST00000409739 DEXIO95424 95 aa35.7■■■■□ 3.31
TRAF3IP1-203ENST00000409739 ANO3Q9BYT9 981 aa35.7■■■■□ 3.31
TRAF3IP1-203ENST00000409739 VPS54Q9P1Q0 977 aa35.7■■■■□ 3.31
TRAF3IP1-203ENST00000409739 CABYRO75952 493 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 CDKL5O76039 1030 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 FOSP01100 380 aaPredicted RBP35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 UBA1P22314 1058 aaKnown RBP35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 AP3B2Q13367 1082 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 CCDC148Q8NFR7 591 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 EMID1Q96A84 441 aaPredicted RBP35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 VTI1AQ96AJ9 217 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 C6orf50Q9HD87 102 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 POLR3EQ9NVU0 708 aa35.69■■■■□ 3.3
TRAF3IP1-203ENST00000409739 A0A0U1RQG5 324 aaPredicted RBP35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 ADAMTS3O15072 1205 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 TGFB3P10600 412 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 ICAM3P32942 547 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 PURAQ00577 322 aaKnown RBP35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SP2Q02086 613 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SEMA3FQ13275 785 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 BRDTQ58F21 947 aaPredicted RBP35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 NECAB1Q8N987 351 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 AFG1LQ8WV93 481 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 GTF3C6Q969F1 213 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SH3GLB2Q9NR46 395 aa35.68■■■■□ 3.3
TRAF3IP1-203ENST00000409739 STK36Q9NRP7 1315 aa35.67■■■■□ 3.3
TRAF3IP1-203ENST00000409739 MYL3P08590 195 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms