RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CCND2P30279 289 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 MCM7P33993 719 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 SEPT14Q6ZU15 432 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 CHMP5Q9NZZ3 219 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 CENPFP49454 3210 aa16.05■□□□□ 0.16
CHRNA1-204ENST00000409323 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 HOXC6P09630 235 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 ITGB5P18084 799 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 NUCB2P80303 420 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 PRR16Q569H4 304 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 PCNX4Q63HM2 1172 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 PDGFCQ9NRA1 345 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 ASB14A6NK59 587 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 ADCY3O60266 1144 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 RGS20O76081 388 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 EDNRBP24530 442 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 DNM1Q05193 864 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 STXBP2Q15833 593 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 CLIC4Q9Y696 253 aa16.04■□□□□ 0.16
CHRNA1-204ENST00000409323 HTTP42858 3142 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 ARP10275 920 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
CHRNA1-204ENST00000409323 CYP3A4P08684 503 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 ARHGEF6Q15052 776 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 TPRNQ4KMQ1 711 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 ANO1Q5XXA6 986 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 MAMDC4Q6UXC1 1216 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 ZNF467Q7Z7K2 595 aaPredicted RBP16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 MXRA8Q9BRK3 442 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 MAF1Q9H063 256 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 TMEM60Q9H2L4 133 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 UBIAD1Q9Y5Z9 338 aa16.02■□□□□ 0.16
CHRNA1-204ENST00000409323 IGLV3-22A0A075B6J6 115 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 ARIH2O95376 493 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 GNRH1P01148 92 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 USP11P51784 963 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 SEMA3FQ13275 785 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 SF3A1Q15459 793 aaKnown RBP16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 RILPL1Q5EBL4 403 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 OLFML2BQ68BL8 750 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 LENG9Q96B70 501 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 GDPD2Q9HCC8 539 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
CHRNA1-204ENST00000409323 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 ADCYAP1R1P41586 468 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 CACNB2Q08289 660 aaPredicted RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 IRF5Q13568 498 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 MTMR1Q13613 665 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 ACVR2BQ13705 512 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 MORC4Q8TE76 937 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 COPS5Q92905 334 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 KATNBL1Q9H079 304 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 JADE2Q9NQC1 790 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 B4DLN1 442 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 ADCY6O43306 1168 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 NEMFO60524 1076 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 ATP9AO75110 1047 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
CHRNA1-204ENST00000409323 CNGA1P29973 690 aa16■□□□□ 0.15
CHRNA1-204ENST00000409323 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms