RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 KCNV1Q6PIU1 500 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC30A9Q6PML9 568 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPP1R21Q6ZMI0 780 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 KIF6Q6ZMV9 814 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ARHGEF18Q6ZSZ5 1173 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SYDE1Q6ZW31 735 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SV2BQ7L1I2 683 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TRPM8Q7Z2W7 1104 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATG9AQ7Z3C6 839 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 KRT25Q7Z3Z0 450 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NBPF5PQ86XG9 351 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 COL23A1Q86Y22 540 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 C2CD5Q86YS7 1000 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 RPUSD2Q8IZ73 545 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 IFNL3Q8IZI9 196 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF654Q8IZM8 581 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ARHGAP24Q8N264 748 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 AGGF1Q8N302 714 aaeCLIP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 GUF1Q8N442 669 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 RIBC1Q8N443 379 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 USP38Q8NB14 1042 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DAGLBQ8NCG7 672 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 BBOF1Q8ND07 529 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPFIBP2Q8ND30 876 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PIP4K2CQ8TBX8 421 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NEK9Q8TD19 979 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MICAL1Q8TDZ2 1067 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NUP133Q8WUM0 1156 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATXN2LQ8WWM7 1075 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 IFT81Q8WYA0 676 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCT6BQ92526 530 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TATDN2Q93075 761 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHKBQ93100 1093 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ITFG2Q969R8 447 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SPDL1Q96EA4 605 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 EDC3Q96F86 508 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CDK5RAP3Q96JB5 506 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CNOT6LQ96LI5 555 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NBPF4Q96M43 638 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TRAPPC9Q96Q05 1148 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 STRBPQ96SI9 672 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CHP1Q99653 195 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 C7orf25Q9BPX7 421 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MXD3Q9BW11 206 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 FOXP3Q9BZS1 431 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TTYH3Q9C0H2 523 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 FAM192AQ9GZU8 254 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NDST4Q9H3R1 872 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NOD2Q9HC29 1040 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 METTL14Q9HCE5 456 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DISC1Q9NRI5 854 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TYW1Q9NV66 732 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 INTS9Q9NV88 658 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NDUFA13Q9P0J0 144 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZSWIM5Q9P217 1185 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPP1R1BQ9UD71 204 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 LRWD1Q9UFC0 647 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DDX20Q9UHI6 824 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 BAIAP2L1Q9UHR4 511 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ITGB1BP2Q9UKP3 347 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TTC7AQ9ULT0 858 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NFU1Q9UMS0 254 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC12A4Q9UP95 1085 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PLAAQ9Y263 795 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC9Q9Y3X0 531 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SAMM50Q9Y512 469 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCDHB6Q9Y5E3 794 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCDHGC5Q9Y5F6 944 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TAF6LQ9Y6J9 622 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PIK3C2AO00443 1686 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 C1orf167Q5SNV9 1468 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MIF4GDA9UHW6 222 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 B4DLN1 442 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KRIT1O00522 736 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RGS16O15492 202 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CTNND1O60716 968 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SMIM24O75264 130 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RTN2O75298 545 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 IDH1O75874 414 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDE8BO95263 885 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 NPTXRO95502 500 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANP32DO95626 131 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 BAG3O95817 575 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KRT14P02533 472 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 GCP02774 474 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MYCNP04198 464 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CSF1RP07333 972 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 MYBP10242 640 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SKIP12755 728 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCG2P13521 617 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ALADP13716 330 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHKG2P15735 406 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 CD44P16070 742 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ACADSP16219 412 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDE6AP16499 860 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RFX1P22670 979 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 RPL13P26373 211 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 HPDP32754 393 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms