RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CAPN11Q9UMQ6 739 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 BCL9LQ86UU0 1499 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 CCDC151A5D8V7 595 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 POTECB2RU33 542 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 KLRC4O43908 158 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PLEKP08567 350 aaPredicted RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PBX1P40424 430 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 MMP10P09238 476 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 ADRA2BP18089 450 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 NOP2P46087 812 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 DDR1Q08345 913 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 LEKR1Q6ZMV7 388 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 SRGNP10124 158 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 POLR2FP61218 127 aaKnown RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 GRB10Q13322 594 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 SEPT2Q15019 361 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 ZBTB5O15062 677 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 MOCS3O95396 460 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 VSNL1P62760 191 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 UBXN2AP68543 259 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 CDC42EP5Q6NZY7 148 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 RAD54LQ92698 747 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 PNKPQ96T60 521 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 ZNF185O15231 689 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 CFBP00751 764 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 IL1R1P14778 569 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 CRKP46108 304 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 RASSF7Q02833 373 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-204ENST00000406949 KIAA0895Q8NCT3 520 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
PCNX4-204ENST00000406949 LRP5O75197 1615 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 TBC1D8O95759 1140 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 APBA3O96018 575 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 PLS1Q14651 629 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
PCNX4-204ENST00000406949 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 SWAP70Q9UH65 585 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 KIF11P52732 1056 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.17□□□□□ -0.3
PCNX4-204ENST00000406949 SASH3O75995 380 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 ALDH1B1P30837 517 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
PCNX4-204ENST00000406949 CAPN2P17655 700 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 COASYQ13057 564 aa13.16□□□□□ -0.3
PCNX4-204ENST00000406949 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-204ENST00000406949 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms