RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PDGFRBP09619 1106 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 GRIK1P39086 918 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 ST5P78524 1137 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 TMPRSS15P98073 1019 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 STAT4Q14765 748 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 HSF5Q4G112 596 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 ANGEL2Q5VTE6 544 aaKnown RBP5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 OVCH1Q7RTY7 1134 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 RAVER1Q8IY67 606 aaKnown RBP5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 FLCNQ8NFG4 579 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 LINC01599Q8WXQ3 324 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 USP7Q93009 1102 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 FBXW5Q969U6 566 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 TMEM169Q96HH4 297 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 CCDC8Q9H0W5 538 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 TMX1Q9H3N1 280 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 C19orf44Q9H6X5 657 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 RXFP1Q9HBX9 757 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 THG1LQ9NWX6 298 aaKnown RBP5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 CCDC39Q9UFE4 941 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 MCM8Q9UJA3 840 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 TMEM59LQ9UK28 342 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 ADAMTS6Q9UKP5 1117 aa5.39□□□□□ -1.55
HMGB1P17-201ENST00000403495 NOTOA8MTQ0 251 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 B4E1Z4 1266 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 C22orf46C9J442 243 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 FAM47E-STBD1D6RA91 191 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 NKRFO15226 690 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 COBLO75128 1261 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 ADAMTS4O75173 837 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 PDE6AP16499 860 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 ADCYAP1R1P41586 468 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 GUCY2FP51841 1108 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 JAM2P57087 298 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 RTP1P59025 263 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 IL2P60568 153 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 TIGD5Q53EQ6 642 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 SIRT2Q8IXJ6 389 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 RBM12BQ8IXT5 1001 aaKnown RBP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 OR2W6PQ8NHA6 318 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 WDR66Q8TBY9 1149 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 CHTF18Q8WVB6 975 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 SYTL4Q96C24 671 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 MISP3Q96FF7 219 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 TRMT2BQ96GJ1 504 aaKnown RBP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 SMAD5Q99717 465 aaKnown RBP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 CELF4Q9BZC1 486 aaKnown RBP5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 IRF2BPLQ9H1B7 796 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 CRTAC1Q9NQ79 661 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 TNFRSF10DQ9UBN6 386 aa5.38□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQ27 194 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQ64 194 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQC6 194 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 TCRBV5S4A2TA0A5A2 114 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 PTPDC1A2A3K4 754 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 F2P00734 622 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 AMY2AP04746 511 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 APPP05067 770 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 GNAT1P11488 350 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 ATP2A2P16615 1042 aaKnown RBP5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 AMY2BP19961 511 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 ENDOUP21128 410 aaKnown RBP5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SCNN1BP51168 640 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 DSG1Q02413 1049 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 MVKQ03426 396 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 DHCR24Q15392 516 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SLC14A2Q15849 920 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SLC51AQ86UW1 340 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 PTRH1Q86Y79 214 aaKnown RBP5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 CHST14Q8NCH0 376 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 NUP43Q8NFH3 380 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 USP33Q8TEY7 942 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 TRIM8Q9BZR9 551 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SMURF1Q9HCE7 757 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 PAK6Q9NQU5 681 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SPTLC3Q9NUV7 552 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 SIT1Q9Y3P8 196 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 WASHC2CQ9Y4E1 1318 aa5.37□□□□□ -1.55
HMGB1P17-201ENST00000403495 GPR39O43194 453 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 MARCH6O60337 910 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 PSPNO60542 156 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 FKBP9O95302 570 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 S100BP04271 92 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 NTRK1P04629 796 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 BPIP17213 487 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 PRKCAP17252 672 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 NAT1P18440 290 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 SPINK2P20155 84 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 SDHBP21912 280 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 MECP2P51608 486 aaKnown RBP5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 DUSP4Q13115 394 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 MTMR1Q13613 665 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms