RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 PTPN18Q99952 460 aa8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 ZNF70Q9UC06 446 aaPredicted RBP8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 SSC5DA1L4H1 1573 aa8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 TAF1P21675 1872 aa8.47□□□□□ -1.05
CEACAM1-208ENST00000403461 TCP10L2B9ZVM9 353 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 FBXO24O75426 580 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 FRAT2O75474 233 aaPredicted RBP8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 SELPP16109 830 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 HOXD10P28358 340 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 HIBADHP31937 336 aaKnown RBP8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 GATA4P43694 442 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 VGLL4Q14135 290 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 NACC1Q96RE7 527 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 ZCCHC17Q9NP64 241 aaKnown RBP8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 KCNK4Q9NYG8 393 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 KIAA1522Q9P206 1035 aaPredicted RBP8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 PCDHAC2Q9Y5I4 1007 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 FAM205AQ6ZU69 1335 aa8.46□□□□□ -1.06
CEACAM1-208ENST00000403461 SNAP23O00161 211 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 ENC1O14682 589 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 DDX3YO15523 660 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 ADAM11O75078 769 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 CYP11A1P05108 521 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 CRKP46108 304 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 RBM25P49756 843 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 CASP7P55210 303 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 NLRP12P59046 1061 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 SNAPC2Q13487 334 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 CAVIN4Q5BKX8 364 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 DCAF15Q66K64 600 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 LMBR1LQ6UX01 489 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 G2E3Q7L622 706 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 BACH2Q9BYV9 841 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 MRPL18Q9H0U6 180 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 TDRD3Q9H7E2 651 aaKnown RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 C9orf78Q9NZ63 289 aaPredicted RBP8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 MAST3O60307 1309 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 IL16Q14005 1332 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 IRS2Q9Y4H2 1338 aa8.45□□□□□ -1.06
CEACAM1-208ENST00000403461 C9orf172C9J069 976 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 GRM8O00222 908 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TLR2O60603 784 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 LACTBP83111 547 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 FOXO4P98177 505 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 UBE4AQ14139 1066 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 CCDC85BQ15834 202 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 SHISA2Q6UWI4 295 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 ERO1BQ86YB8 467 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TDRD7Q8NHU6 1098 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 DPF3Q92784 378 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TEKT1Q969V4 418 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 WRNIP1Q96S55 665 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TRIM56Q9BRZ2 755 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 HTATIP2Q9BUP3 242 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 NOC4LQ9BVI4 516 aaKnown RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 NRSN2Q9GZP1 204 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TMEM39BQ9GZU3 492 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 TNRC18O15417 2968 aaPredicted RBP8.44□□□□□ -1.06
CEACAM1-208ENST00000403461 H0YGN5 161 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 GYG1P46976 350 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 HDLBPQ00341 1268 aaKnown RBP8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 CHAF1AQ13111 956 aaPredicted RBP8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 PPIL2Q13356 520 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 TSNAXIP1Q2TAA8 658 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 BEND3Q5T5X7 828 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 TMEM130Q8N3G9 435 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 RAET1EQ8TD07 263 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 SH3TC2Q8TF17 1288 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 NR2E3Q9Y5X4 410 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
CEACAM1-208ENST00000403461 NME2P22392 152 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 UBXN2AP68543 259 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 PPATQ06203 517 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 POU4F3Q15319 338 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 SULF2Q8IWU5 870 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 TEPSINQ96N21 525 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 USP26Q9BXU7 913 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 ZNF341Q9BYN7 854 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 SNCAIPQ9Y6H5 919 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 AOX1Q06278 1338 aa8.42□□□□□ -1.06
CEACAM1-208ENST00000403461 PSME4Q14997 1843 aa8.41□□□□□ -1.06
CEACAM1-208ENST00000403461 LOC100289279A0A1B0GTE1 492 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms