RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 CD4P01730 458 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 KRT32Q14532 448 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 APOA5Q6Q788 366 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 SYNE3Q6ZMZ3 975 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 VSIG10LQ86VR7 867 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 KCNB2Q92953 911 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 PPP1R12CQ9BZL4 782 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 TRPV6Q9H1D0 765 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 DDX41Q9UJV9 622 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
CSNK1D-205ENST00000403276 A6NJR5 290 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 HSPA4P34932 840 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 ARHGAP1Q07960 439 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 BRDTQ58F21 947 aaPredicted RBP19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 USP17L6PQ6QN14 398 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 TMTC3Q6ZXV5 915 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 AFG1LQ8WV93 481 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 MTG1Q9BT17 334 aaPredicted RBP19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 MRVI1Q9Y6F6 885 aa19.4■□□□□ 0.7
CSNK1D-205ENST00000403276 SORBS3O60504 671 aa19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 B4GALT4O60513 344 aa19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 GH1P01241 217 aa19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 CHMP4BP1P59074 171 aa19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 FPGSQ05932 587 aa19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 JAKMIP1Q96N16 626 aaKnown RBP19.39■□□□□ 0.69
CSNK1D-205ENST00000403276 LAMA2P24043 3122 aaKnown RBP19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 CCND2P30279 289 aa19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 CYP2C18P33260 490 aa19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 TRIP12Q14669 1992 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 NBPF20Q3BBV1 942 aa19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 NAP1L2Q9ULW6 460 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-205ENST00000403276 UMODL1Q5DID0 1318 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 KLF18A0A0U1RQI7 1052 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 MEIS2O14770 477 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 ZBTB43O43298 467 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 REC8O95072 547 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 MMP3P08254 477 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 HMGB1P09429 215 aaKnown RBP19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 SP2Q02086 613 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 FAM47CQ5HY64 1035 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 MFSD5Q6N075 450 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 Q6ZUG5 572 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 Q7L0L9 218 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 SMARCC2Q8TAQ2 1214 aa19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 ALDH8A1Q9H2A2 487 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 TRMT13Q9NUP7 481 aaKnown RBP19.37■□□□□ 0.69
CSNK1D-205ENST00000403276 CNTNAP5Q8WYK1 1306 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 KPNA6O60684 536 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 CSF2RAP15509 400 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 CDC27P30260 824 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 FGD1P98174 961 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 APOBRQ0VD83 1088 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 RTN1Q16799 776 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 BLOC1S2Q6QNY1 142 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 DHX37Q8IY37 1157 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 CUL5Q93034 780 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 SEZ6LQ9BYH1 1024 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 BCAS3Q9H6U6 928 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 RBM28Q9NW13 759 aaKnown RBP19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
CSNK1D-205ENST00000403276 FRMPD4Q14CM0 1322 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 GOLGA8AA7E2F4 631 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 GOLGA8BA8MQT2 603 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 CYP2C9P11712 490 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 FUT2Q10981 343 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 C16orf59Q7L2K0 433 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 HEATR3Q7Z4Q2 680 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 HIPK3Q9H422 1215 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 PSTPIP2Q9H939 334 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 SCN5AQ14524 2016 aa19.35■□□□□ 0.69
CSNK1D-205ENST00000403276 PIK3CDO00329 1044 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 GGPS1O95749 300 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 ACRP10323 421 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 CASTP20810 708 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 CCL23P55773 120 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 LAMC2Q13753 1193 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 UBE2SQ16763 222 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 MYSM1Q5VVJ2 828 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 KAT2BQ92831 832 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 BRF1Q92994 677 aa19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.34■□□□□ 0.695e-8■■□□□ 13.5
CSNK1D-205ENST00000403276 NOC4LQ9BVI4 516 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 V9GY48 417 aaPredicted RBP19.34■□□□□ 0.69
CSNK1D-205ENST00000403276 UBA1P22314 1058 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 RPS6KB1P23443 525 aa19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 ADD1P35611 737 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 PPIGQ13427 754 aaKnown RBP eCLIP19.33■□□□□ 0.685e-8■■□□□ 13.2
CSNK1D-205ENST00000403276 DGKDQ16760 1214 aa19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 CELF3Q5SZQ8 465 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 KCNV1Q6PIU1 500 aa19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 DEFB123Q8N688 67 aa19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 EMID1Q96A84 441 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.68
CSNK1D-205ENST00000403276 USP26Q9BXU7 913 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms