RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 MCM6Q14566 821 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 RBM26Q5T8P6 1007 aaKnown RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 CENPPQ6IPU0 288 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 CREBRFQ8IUR6 639 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 SLFN12Q8IYM2 578 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 GUF1Q8N442 669 aaKnown RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 AMNQ9BXJ7 453 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 KCNQ5Q9NR82 932 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 CAPN11Q9UMQ6 739 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 PCDHA1Q9Y5I3 950 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 SLX4Q8IY92 1834 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 EFCAB8A8MWE9 144 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 LRRC63Q05C16 580 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 STK4Q13043 487 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 AOC3Q16853 763 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 FKBP15Q5T1M5 1219 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 CNOT6LQ96LI5 555 aaKnown RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 TSG101Q99816 390 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 TUBGCP2Q9BSJ2 902 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 DESI2Q9BSY9 194 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 ANO3Q9BYT9 981 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 HERC5Q9UII4 1024 aaKnown RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 LUC7L2Q9Y383 392 aaKnown RBP11.99□□□□□ -0.49
LINC00649-202ENST00000400353 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
LINC00649-202ENST00000400353 MYMKA6NI61 221 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 TBX3O15119 743 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 MTIF2P46199 727 aaKnown RBP11.98□□□□□ -0.49
LINC00649-202ENST00000400353 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 ELF2Q15723 593 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 FIGNQ5HY92 759 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 ANKRD40Q6AI12 368 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 HAS1Q92839 578 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 DNAJC7Q99615 494 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 PCDHA12Q9UN75 941 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 A0A1W2PQJ5 194 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 F5H6K3 240 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 CACNB3P54284 484 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 TUBB4BP68371 445 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 KLRC3Q07444 240 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 MTF1Q14872 753 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 FBXO11Q86XK2 927 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 GPATCH11Q8N954 259 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 KIAA0895Q8NCT3 520 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 UBXN4Q92575 508 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 ERGIC2Q96RQ1 377 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 MRPL44Q9H9J2 332 aaKnown RBP11.98□□□□□ -0.49
LINC00649-202ENST00000400353 ZNHIT6Q9NWK9 470 aaKnown RBP11.98□□□□□ -0.49
LINC00649-202ENST00000400353 HDAC9Q9UKV0 1011 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
LINC00649-202ENST00000400353 SCN9AQ15858 1988 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 POTEMA6NI47 508 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 PES1O00541 588 aaKnown RBP11.97□□□□□ -0.49
LINC00649-202ENST00000400353 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 FCER1AP12319 257 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 BMP3P12645 472 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 CHRNA5P30532 468 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 ERVK-24P63145 666 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
LINC00649-202ENST00000400353 HAUS3Q68CZ6 603 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
LINC00649-202ENST00000400353 VPS33BQ9H267 617 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 KCNMB3Q9NPA1 279 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 ARGLU1Q9NWB6 273 aaPredicted RBP11.97□□□□□ -0.49
LINC00649-202ENST00000400353 PSME4Q14997 1843 aa11.97□□□□□ -0.49
LINC00649-202ENST00000400353 TTC26A0AVF1 554 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 RAD21O60216 631 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 TADA3O75528 432 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 NDUFB10O96000 172 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 ZBED6P86452 979 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 EHHADHQ08426 723 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 Q4G0T1 1027 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 ZNF662Q6ZS27 426 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 KCTD17Q8N5Z5 321 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 ERMNQ8TAM6 284 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 DDX12PQ92771 950 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 WDR24Q96S15 920 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
LINC00649-202ENST00000400353 ARHGEF10LQ9HCE6 1279 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 SLC39A2Q9NP94 309 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 OGFRQ9NZT2 677 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 PCDHAC2Q9Y5I4 1007 aa11.96□□□□□ -0.49
LINC00649-202ENST00000400353 B4DLN1 442 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.5
LINC00649-202ENST00000400353 KRT83P78385 493 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 PPP2R3AQ06190 1150 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 MEA1Q16626 185 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 MAN2A1Q16706 1144 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 FAM20AQ96MK3 541 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms