RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 RAPGEF3O95398 923 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 RASA1P20936 1047 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 PMLP29590 882 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ATP13A5Q4VNC0 1218 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ZRANB3Q5FWF4 1079 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 LIG3P49916 1009 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 MYLK4Q86YV6 388 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM51Q9BSJ1 452 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF318Q5VUA4 2279 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 MYO1DO94832 1006 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 IL10P22301 178 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TALDO1P37837 337 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CYP4A11Q02928 519 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TWISTNBQ3B726 338 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CYP4A22Q5TCH4 519 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SYT10Q6XYQ8 523 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ESR2Q92731 530 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF233A6NK53 670 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 KRT20P35900 424 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CBFBQ13951 182 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CRLF3Q8IUI8 442 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ANKS3Q6ZW76 656 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 DCLK2Q8N568 766 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ABCE1P61221 599 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SHROOM1Q2M3G4 852 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 RUNDC3AQ59EK9 446 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SZRD1Q7Z422 152 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM192AQ9GZU8 254 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SPRTNQ9H040 489 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 M0R3G1 203 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 POLR2DO15514 142 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 DCTN2Q13561 401 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 WTAPQ15007 396 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CABP4P57796 275 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 KRT17Q04695 432 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TRIM16LQ309B1 348 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 IFIT1BQ5T764 474 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 NEK10Q6ZWH5 1172 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 RMDN1Q96DB5 314 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CDC27P30260 824 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 HAND2P61296 217 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 OSCP1Q8WVF1 389 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 ANKRD49Q8WVL7 239 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 UBE3AQ05086 875 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 ACAD11Q709F0 780 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 XPO6Q96QU8 1125 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 SPATA2Q9UM82 520 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 RNF103-CHMP3A0A140T963 221 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 N4BP1O75113 896 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 PSME3P61289 254 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TYRO3Q06418 890 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 SFSWAPQ12872 951 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 KARSQ15046 597 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 PEG10Q86TG7 708 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 DHX36Q9H2U1 1008 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 DENND2AQ9ULE3 1009 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 SLC12A1Q13621 1099 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TCEAL5Q5H9L2 206 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CHMP1BQ7LBR1 199 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 MFN1Q8IWA4 741 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 WDR64B1ANS9 1081 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CNGA3Q16281 694 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 KIF19Q2TAC6 998 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 KRT39Q6A163 491 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CAMK1DQ8IU85 385 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TMEM87BQ96K49 555 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 ANAPC7Q9UJX3 599 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 ACADLP28330 430 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 DTHD1Q6ZMT9 781 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 AOPEPQ8N6M6 819 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TCP11Q8WWU5 503 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 PJA2O43164 708 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 RTN1Q16799 776 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 BRAPQ7Z569 592 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 RAB42Q8N4Z0 105 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 TMEM60Q9H2L4 133 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 INTS9Q9NV88 658 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CHUKO15111 745 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 SERPINH1P50454 418 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 NAPAP54920 295 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 IGSF22Q8N9C0 903 aa9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-220ENST00000399655 CACNA2D2Q9NY47 1150 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms