RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 CCDC155Q8N6L0 562 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 JAG2Q9Y219 1238 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 PECAM1P16284 738 aaPredicted RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 TRPM8Q7Z2W7 1104 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 ABCF3Q9NUQ8 709 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 UTP11Q9Y3A2 253 aaKnown RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 SLC5A1P13866 664 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 RAD23BP54727 409 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 CAVIN3Q969G5 261 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 DNAJC7Q99615 494 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 KRT23Q9C075 422 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 AGLP35573 1532 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ALDH5A1P51649 535 aaPredicted RBP16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
ITSN1-210ENST00000399353 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 DLGAP2Q9P1A6 1054 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 CNGA1P29973 690 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF263O14978 683 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ITGA6P23229 1130 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ZFATQ9P243 1243 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
ITSN1-210ENST00000399353 RTN2O75298 545 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.2
ITSN1-210ENST00000399353 GRIK3Q13003 919 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 TCERG1LQ5VWI1 586 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 DENND2CQ68D51 928 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 SNAP23O00161 211 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 WNT7AO00755 349 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 SART1O43290 800 aaKnown RBP16.27■□□□□ 0.2
ITSN1-210ENST00000399353 STARD3NLO95772 234 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 GBP1P32455 592 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 COPB2P35606 906 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
ITSN1-210ENST00000399353 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 LRRC41Q15345 812 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 NTRK3Q16288 839 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 ANKRD20A2Q5SQ80 823 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 ANKRD20A1Q5TYW2 823 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
ITSN1-210ENST00000399353 MRRFQ96E11 262 aaKnown RBP16.27■□□□□ 0.2
ITSN1-210ENST00000399353 ETNK1Q9HBU6 452 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 PICK1Q9NRD5 415 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 TCP11L1Q9NUJ3 509 aa16.27■□□□□ 0.2
ITSN1-210ENST00000399353 BMP15O95972 392 aa16.27■□□□□ 0.19
ITSN1-210ENST00000399353 ZNF844Q08AG5 666 aa16.27■□□□□ 0.19
ITSN1-210ENST00000399353 CHADLQ6NUI6 762 aa16.27■□□□□ 0.19
ITSN1-210ENST00000399353 TMEM154Q6P9G4 183 aa16.27■□□□□ 0.19
ITSN1-210ENST00000399353 AZI2Q9H6S1 392 aa16.27■□□□□ 0.19
ITSN1-210ENST00000399353 KLHL33A6NCF5 533 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 TSPY2A6NKD2 308 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 SPDYE3A6NKU9 549 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 CETN3O15182 167 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 SHBGP04278 402 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 INTS8Q75QN2 995 aaKnown RBP16.26■□□□□ 0.19
ITSN1-210ENST00000399353 PEX26Q7Z412 305 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 IGDCC4Q8TDY8 1250 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ESR2Q92731 530 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ARHGEF2Q92974 986 aaKnown RBP16.26■□□□□ 0.19
ITSN1-210ENST00000399353 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 TRAF5O00463 557 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 FCER1AP12319 257 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 HOOK3Q86VS8 718 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
ITSN1-210ENST00000399353 SALL4Q9UJQ4 1053 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
ITSN1-210ENST00000399353 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 XRCC4Q13426 336 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 BIRC3Q13489 604 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 MTMR3Q13615 1198 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 AKNAD1Q5T1N1 836 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 MIS18BP1Q6P0N0 1132 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 LPIN2Q92539 896 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 DNAJC17Q9NVM6 304 aaKnown RBP16.26■□□□□ 0.19
ITSN1-210ENST00000399353 A2ML1A8K2U0 1454 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 TTI1O43156 1089 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 FLT3P36888 993 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 RPS6KA3P51812 740 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ERVK-9P63128 1117 aa16.26■□□□□ 0.19
ITSN1-210ENST00000399353 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms